Gene SAG0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0317 
Symbolsun 
ID1013106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp326001 
End bp327323 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content36% 
IMG OID637315509 
Productsun protein 
Protein accessionNP_687351 
Protein GI22536500 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGAATG ATTGGAAAAA GAGTGCGCGT GGTTTAGCTT TAATGACTTT AGAGGAAGTT 
TTTGATAAAG GAGCTTATTC TAATATCGCA CTTAATAAGA GTTTAAAAAA ATCTAGACTA
TCAGATAAAG ATCGTGCCTT AGTAACAGAA ATTGTCTATG GAACTGTGGC TAGAAAAATA
ACGCTAGAAT GGTATCTATC ACACTTTATA GTTGATCGTG ATAAGCTTGA ATTATGGGTA
TATCATCTCT TGCTACTGAG CCTTTATCAA CTACTCTATC TGGACAACAT CCCAGATCAC
GCTATTGTTA ATGATGCTGT CACTATTGCT AAGAATCGAG GCAATAAAAA GGGTGCTGAA
AAGTTAATTA ATGCCGTTTT ACGAAGAGTA AGTTCGGAGA CGCTCCCTGA AATTGCATCA
ATAAAACGCC AAAACAAACG TTACTCTGTT GCTTATTCCA TGCCAGTGTG GCTCGTAAAA
AAATTAATTG ACCAATATGG TGAGACAAGA GCTTTAGCTA TTATGGAGAG TTTATTTGAG
CGAAATAAAG CCAGTCTTCG TGTGACTGAC TTATCGCAAA AACAAACTAT CAAAGAAACT
TTAAATGTTA GAGATTCACA TATTGCAGAG ACAGCTTTAG TTGCAGACTC AGGAAATTTT
GCATCGACAT CATTTTTCCA AGATGGCCTC ATTACTATCC AAGATGAATC TAGTCAATTA
GTTGCTCCAA CACTCAAAGT CTCAGGTAAT GACCAAGTAT TGGATGCATG TAGTGCACCA
GGAGGAAAAA CAAGTCATAT CGCCTCATAT TTGACTACAG GGGCAGTAAC TGCTTTAGAT
TTGTATGATC ATAAATTGGA ATTGGTTATG GAAAATGCAA AACGCCTAGG TCTGTCAGAT
AAGATAAAAA CTAAAAAGTT AGATGCAAGT AAAGCTCATG AGTATTTTCT TGAGGATACT
TTTGACAAAA TTTTAGTAGA CGCACCTTGT TCAGGTATCG GGCTAATTCG CCGTAAACCA
GATATTAAGT ACAATAAAGC TAATCAAGAC TTTGAAGCAC TCCAAGAGAT TCAATTGTCT
ATCCTATCTA GCGTTTGTCA AACGCTACGT AAAGGTGGTA TAATAACCTA TAGCACTTGT
ACCATTTTTG AGGAAGAAAA TTTTCAAGTT ATTGAAAAAT TCTTAGAAAA CCACCCCAAT
TTTGAGCAAG TAGAACTGAG TCATACACAA GAGGATATTG TAAAGAGAGG CTGTATTAGT
ATAAGCCCTG AACAATATCA TACAGATGGC TTTTTTATTG GACAAGTCAA ACGTATCTTG
TAG
 
Protein sequence
MANDWKKSAR GLALMTLEEV FDKGAYSNIA LNKSLKKSRL SDKDRALVTE IVYGTVARKI 
TLEWYLSHFI VDRDKLELWV YHLLLLSLYQ LLYLDNIPDH AIVNDAVTIA KNRGNKKGAE
KLINAVLRRV SSETLPEIAS IKRQNKRYSV AYSMPVWLVK KLIDQYGETR ALAIMESLFE
RNKASLRVTD LSQKQTIKET LNVRDSHIAE TALVADSGNF ASTSFFQDGL ITIQDESSQL
VAPTLKVSGN DQVLDACSAP GGKTSHIASY LTTGAVTALD LYDHKLELVM ENAKRLGLSD
KIKTKKLDAS KAHEYFLEDT FDKILVDAPC SGIGLIRRKP DIKYNKANQD FEALQEIQLS
ILSSVCQTLR KGGIITYSTC TIFEEENFQV IEKFLENHPN FEQVELSHTQ EDIVKRGCIS
ISPEQYHTDG FFIGQVKRIL