Gene SAG0299 details

Gene Information

• Locus tag: SAG0299
• Symbol: recU
• ID: 1013088
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 310004
• End bp: 310603
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637315492
• Product: Holliday junction-specific endonuclease
• Protein accession: NP_687334
• Protein GI: 22536483
• COG category: [R] General function prediction only
• COG ID: [COG3331] Penicillin-binding protein-related factor A, putative recombinase
• TIGRFAM ID: [TIGR00648] recombination protein U

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0429968
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAACT ATCCACATCA GCTTATTCGG AAAACAACAG TTACAAAATC AAAGAAAAAG 
AAAATCGATT TTGCCAACCG TGGTATGTCA TTTGAAGCTG CTATCAATGC AACCAATGAC 
TACTATTTGT CTCACGAATT AGCTGTCATT CATAAGAAAC CAACGCCAGT ACAAATCGTC 
AAGGTAGATT ATCCTAAACG TAGTCGTGCT AAGATTGTAG AAGCTTATTT TAGACAAGCT 
TCTACTACTG ATTATTCTGG TGTTTACAAA GGTTACTATA TTGACTTTGA AGCCAAAGAA 
ACCCGGCAGA AAACTGCTAT GCCTATGAAA AATTTTCATG CTCACCAAAT AGAGCACATG 
GCAAATGTAT TACAGCAAAA AGGGATTTGC TTTGTCTTGC TTCATTTTTC CACACTTAAG 
GAAACCTATC TACTCCCTGC TAATGAGTTA ATTTCATTTT ATCAGATTGA TAAAGGCAAT 
AAATCAATGC CTATTGATTA TATCAGAAAA AATGGATTTT TCGTAAAGGA GAGTGCCTTT 
CCTCAAGTCC CTTACTTAGA TATTATTGAA GAAAAATTAT TAGGCGGTGA TTACAATTAA 

 

Protein sequence

MVNYPHQLIR KTTVTKSKKK KIDFANRGMS FEAAINATND YYLSHELAVI HKKPTPVQIV 
KVDYPKRSRA KIVEAYFRQA STTDYSGVYK GYYIDFEAKE TRQKTAMPMK NFHAHQIEHM 
ANVLQQKGIC FVLLHFSTLK ETYLLPANEL ISFYQIDKGN KSMPIDYIRK NGFFVKESAF 
PQVPYLDIIE EKLLGGDYN