Gene SAG0214 details

Gene Information

• Locus tag: SAG0214
• Symbol: rplM
• ID: 1012988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 230809
• End bp: 231255
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637315392
• Product: 50S ribosomal protein L13
• Protein accession: NP_687249
• Protein GI: 22536398
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000083935
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAA CAACTTTCAT GGCTAAACCA GGCCAAGTTG AACGCAAATG GTACGTTGTT 
GACGCAGCAG ATGTACCTCT TGGACGTCTT TCTGCAGTAG TTGCTAGCGT ACTTCGCGGA 
AAAAACAAAC CAACTTTCAC ACCACACACT GATACAGGTG ACTTTGTGAT TGTTATCAAT 
GCTGAAAAAG TTAAATTAAC TGGTAAAAAA GCGTCAGATA AAATCTACTA CACTCACTCA 
ATGTATCCAG GTGGTTTGAA ACAAATCTCA GCAGGTGAAC TTCGTTCTAA AAATGCTGTT 
CGTTTGATTG AAAAATCAGT TAAAGGCATG CTTCCACATA ACACTCTTGG ACGTGCACAA 
GGTATGAAAT TGAAAGTATT TGTTGGCGGT GAGCATACAC ATGCTGCACA ACAACCAGAA 
GTACTTGATA TCTCAGGACT TATCTAA 

 

Protein sequence

MNKTTFMAKP GQVERKWYVV DAADVPLGRL SAVVASVLRG KNKPTFTPHT DTGDFVIVIN 
AEKVKLTGKK ASDKIYYTHS MYPGGLKQIS AGELRSKNAV RLIEKSVKGM LPHNTLGRAQ 
GMKLKVFVGG EHTHAAQQPE VLDISGLI