Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0143 |
Symbol | csdB |
ID | 1012912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 153056 |
End bp | 154288 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637315317 |
Product | selenocysteine lyase |
Protein accession | NP_687179 |
Protein GI | 22536328 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTAC TAGATAGTTA TAAACTAAAG CAAGATTTCC CAATTTTAAA TCAATTAGTT AATGATGAGC CGCTTATCTA TTTAGATAAT GCAGCAACGA CACAAAAACC GAATCAAGTT TTAGAAGCTT TGCGAGACTA CTACCAAAAC GACAATGCAA ATGTCCATCG TGGTGTTCAT ACTTTAGCAG AACGAGCGAC TGCTCAGTAC GAGAATGCTC GTGAAAAAGC AAGGCAGTTT TTAAATGCTA AATTAAGTAA AGAAATTTTA TTCACACGTG GCACCACAAC AGGATTAAAT TGGGTAGCTA AGTTTGCCGA AAGTATTTTA GAACGAGGTG ATGAGGTACT TATTTCCATT ATGGAGCATC ATTCTAATAT TATCCCATGG CAACAAGCTT GCGAGAGAAC TGGCGCTAAA TTGGTTTATG CCTATCTAAA AGATGGTTCT TTAGATTTAG AAGATTTCTA TAATAAATTA TCCTCTAAAA CTAAATTTGT TAGTTTGGCA CATATCTCAA ATGTACTTGG CTGTGTTACA CCAGTAAAAG CAATAGCAGA ACGTGTACAT CAAGTTGGGG CATACATGGT TGTTGATGGA GCTCAATCAG CGCCACATAT GGCGATTGAT GTTCAAGACC TTGATTGTGA TTTCTTCGCC TTATCTGGCC ATAAGATGCT TGGTCCTACT GGTATTGGTG TTCTTTATGG GAAAGAAAGC ATTTTAGATA AGATGCCACC TGTCGAATTT GGTGGTGAAA TGATTGATTT TGTCTATGAG CAAAGTGCAA CATGGAAGGA ATTGCCCTGG AAGTTTGAAG CTGGAACGCC TAATATTGCT GGAGCGATCG CTTTTGGAGA AGCTTTAGAT TATTTAACGG ATGTTGGTAT GGATGAGATT CATCAATATG AACAAAGTTT AGTTTCTTAT GTGTTGCCTA AATTACAGGC TATCGATGGT TTAACTATTT ACGGACCTAG TGATGCTGAA TCTCATGTAG GCGTTATTGC CTTCAATTTA GAAGGTTTAC ACCCACATGA TGTGGCAACT GCAATGGATT ACGAAGGAGT GGCTGTTCGT GCAGGTCATC ATTGTGCACA ACCCCTTATT AATCATCTTG GTATCCATTC GGCGGTTCGA GCAAGTTTCT ATTTCTATAA TACCAAAGAG GATTGCGACA AATTGGTAGA CGCTATCCAA AAAACTAAGG AGTTTTTCAA TGGCACTCTC TAA
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Protein sequence | MTLLDSYKLK QDFPILNQLV NDEPLIYLDN AATTQKPNQV LEALRDYYQN DNANVHRGVH TLAERATAQY ENAREKARQF LNAKLSKEIL FTRGTTTGLN WVAKFAESIL ERGDEVLISI MEHHSNIIPW QQACERTGAK LVYAYLKDGS LDLEDFYNKL SSKTKFVSLA HISNVLGCVT PVKAIAERVH QVGAYMVVDG AQSAPHMAID VQDLDCDFFA LSGHKMLGPT GIGVLYGKES ILDKMPPVEF GGEMIDFVYE QSATWKELPW KFEAGTPNIA GAIAFGEALD YLTDVGMDEI HQYEQSLVSY VLPKLQAIDG LTIYGPSDAE SHVGVIAFNL EGLHPHDVAT AMDYEGVAVR AGHHCAQPLI NHLGIHSAVR ASFYFYNTKE DCDKLVDAIQ KTKEFFNGTL
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