Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0042 |
Symbol | |
ID | 1012792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 56906 |
End bp | 57709 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637315197 |
Product | RpiR family phosphosugar-binding transcriptional regulator |
Protein accession | NP_687078 |
Protein GI | 22536227 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATTT ATGACCAAAT TGAGTCTGCT CTTGATTTAA TGACTGATTT AGAACGTGAA ATTGCTTGTT ATTTTATGGG GCAGCCCATT TCAAAAGACG CTCTTGCTTC TACCATTGTC ACTAAGCAAC TACACATTTC ACAAGCAGCC TTAACGCGTT TTGCTAAAAA ATGTGGGTTT AAAGGCTATC GTGAATTTGT TTTTGAATAT TTAAAAAGCC ATGAGACCAT CAGTCAACAA TTATACGGTC TTCAAAATGA CAACACTAAG AAAGTATTTA TGAATTATCA AGAGATGATT TCTAAATCTG CTGATATTAT TGATGAAGAA CAGCTTCTAG AAGTATCACA TATGATTGAG CAAGCTGATC GTGTTTATTT TTATGGCAAA GGGAGCTCAT CGCTAGTAGC TAAAGAATTT AAAATACGCC TTATGAGGCT GGGAGTGATT TGTGAGGCTC TGGATGATAC AGATAGTTTC TCATGGACTA ATAGTATTGT TAATGATAGA TGCCTCGTCA TTGCCTTCTC ACTTTCTGGG AACACCAACT CTGTTATTGG TGCCTTAAAA ATCGCAAGTT GTCACGGAGC TAAAACCGTT CTATTTACAA AACAACCTCA CACAATTGAC TATGCTTTTG ACAAGATTAT TCAGGTGGCT TCTGCTAGGC ATTTAGACTA CGGCAATAGA ATTTCGCCTC AGATCCCAAT GTTAATCATG GTAGATATTA TCTATGCACA ATTTTTAGAT ATTAATAAAA TAGAAAAAGA GCGAATTTTT AGAGAAACCA TTATTCAACG CTAA
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Protein sequence | MTIYDQIESA LDLMTDLERE IACYFMGQPI SKDALASTIV TKQLHISQAA LTRFAKKCGF KGYREFVFEY LKSHETISQQ LYGLQNDNTK KVFMNYQEMI SKSADIIDEE QLLEVSHMIE QADRVYFYGK GSSSLVAKEF KIRLMRLGVI CEALDDTDSF SWTNSIVNDR CLVIAFSLSG NTNSVIGALK IASCHGAKTV LFTKQPHTID YAFDKIIQVA SARHLDYGNR ISPQIPMLIM VDIIYAQFLD INKIEKERIF RETIIQR
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