Gene Rxyl_3212 details

Gene Information

• Locus tag: Rxyl_3212
• ID: 4115008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 3222345
• End bp: 3223031
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638037976
• Product: single-stranded nucleic acid binding R3H
• Protein accession: YP_645928
• Protein GI: 108805991
• COG category: [R] General function prediction only
• COG ID: [COG1847] Predicted RNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGAGC AGCATAGGGA GTTTCACGCG TCTGACGTGG AGGAGGCGGT CCGTAAGGCC 
GCGAAGTCTC TCGGGGTTTC GCCGGAGGAG CTGCGTTACG AGGTGCTGGA CGAGGGCAGC 
GCGGGCTTTC TGGGGATAGG CGCCAGGGAC GCCCGCATCC GGGTGCTCGA GGAGCACGCC 
GAGCAGCCCT CCGGGGCAGC GGAGCCCGAG GGGGAGCGTG GGGCTGGAGA GGCCCCCGCC 
GAACTTCTGG AGGAGATCGA ACGGCTCACG AGCGAGATAG TGCACGCCAT GGGGCTCGGG 
GGCCGCGTGG ACGTCTACGA CGCCGGTGAC TTTATCGCCG CGGATATCGC TACGGACCAC 
ACGGCGATCC TTATAGGCCA GAAGGGGGAG ACGATCGACG CCCTCCAGTA CCTGATCAAC 
TCGGCCATCT ATCGGAACAG ACCCTTCGTG AAGAGGATCA TCCTGGACTC CGAGGGGTAC 
CGCCAGCGCC GGATAGAGGC CATACAGGGC ATAGCTCACC GTAGCGCCCG TAGGGCTATC 
CGGGAACGGC GCTCCATCAA GCTCCCACCC ATGAGCGCCG CAGAACGGCG GATAGTCCAC 
GTCTACCTCA AAGACAACCC CCGCGTCACC ACCTTCAGCG AGGGAGCCGG GGAAAACCGC 
AGGGTCACCG TGGCGCCGCG CCGCTAG 

 

Protein sequence

MMEQHREFHA SDVEEAVRKA AKSLGVSPEE LRYEVLDEGS AGFLGIGARD ARIRVLEEHA 
EQPSGAAEPE GERGAGEAPA ELLEEIERLT SEIVHAMGLG GRVDVYDAGD FIAADIATDH 
TAILIGQKGE TIDALQYLIN SAIYRNRPFV KRIILDSEGY RQRRIEAIQG IAHRSARRAI 
RERRSIKLPP MSAAERRIVH VYLKDNPRVT TFSEGAGENR RVTVAPRR