| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3184 |
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| Symbol | |
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| ID | 4114981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3196032 |
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| End bp | 3197150 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638037949 |
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| Product | aminomethyltransferase |
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| Protein accession | YP_645901 |
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| Protein GI | 108805964 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000207434 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAGCGG TGGCGAGGGG AACCCTGCGC CGCACCCCGC TCTACGAGGA GCACAGGGCC
CTGGGCGCCC GGCTCGTGGA CTTCGCGGGC TGGGAGATGC CGGTGCAGTA CGCGGGGATA
AAGGCCGAGC ACGAGGCGGT GCGCACCCGC GCCGGGCTCT TCGACGTCTC GCACATGGGG
GAGGTGGCCT TCCGCGGCCC GGACGCCGAG AGGGCGCTGC AGCGCCTCCT CACCCGCGAC
GTCTCCCGGC TGGGTGAGGG GCAGGCGGGC TATGCCGCCG TCTGCCTGGA GAGCGGGGGG
ACGGTGGACG ACGTGATCGC CTACCGCCGC GGGGAGGGCT TCCTCGTGGT GGTGAACGCC
GCCAACCGCG AGAAAGACCT CGCCCACTTC CGCAGGCACA CCGCAGACCT CGACGTAGAG
ATCTCCGACG AGACGGAGGA GTGGGCGCTG CTCGCGCTGC AGGGCCCGGA GGCCGAGCGG
CTCCTGCAGC CGTTCGTCGC GGGAGACCTC TCCGCCCTCG GGCGCTACCG CTTCCTCGAG
ACGCACGTGG ACGGGGGGGA GGCGATCGTG GCCCGCACCG GCTACACCGG AGAGGACGGC
TTCGAGGTCT TTCTCCGCCC CGCAGAGGCC CCCTCCCTGT GGCGGCGCCT CGTCGAGGCG
GGGGCTGCTC CGGCCGGGCT CGGGGCGCGC GACACGCTGC GCCTGGAGGC GGGGATGTGC
CTCTACGGCA ACGAGCTGGA CGAGGAGACC ACGCCGCTTG AGGCCGGGAT CTCCTTCGCC
GTCCACCTAC ACAAGGAGGA GGAGTTCGTC GGGCAGCGGG CCCTGCAGAG ACAGCGGGAG
CGCGGGCTGC GCAAAAAGCT AGTCGGCTTC GAGCTGGAGG GGCGGGGCAT AGCCCGCCAC
GGCTACCCGG TCGCCGTGGG CGGCGAGCGG GCGGGCGTGG TCACCAGCGG GACGATGTCC
CCGACGCTGG GCCGCGCCAT CGGGCTCGCC TACGTCCCCC CCGAGACGGA GGGCGGCTTC
GAAGTGCTCA TCCGGGAGCG GCCGGTCCCG GCCAGGATCG TCCCGCTCCC CTTCTACCGG
CGCAAGAGAA ACGACCCCGA GGGAGGAGCC AGTGGCTGA
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| Protein sequence | MVAVARGTLR RTPLYEEHRA LGARLVDFAG WEMPVQYAGI KAEHEAVRTR AGLFDVSHMG
EVAFRGPDAE RALQRLLTRD VSRLGEGQAG YAAVCLESGG TVDDVIAYRR GEGFLVVVNA
ANREKDLAHF RRHTADLDVE ISDETEEWAL LALQGPEAER LLQPFVAGDL SALGRYRFLE
THVDGGEAIV ARTGYTGEDG FEVFLRPAEA PSLWRRLVEA GAAPAGLGAR DTLRLEAGMC
LYGNELDEET TPLEAGISFA VHLHKEEEFV GQRALQRQRE RGLRKKLVGF ELEGRGIARH
GYPVAVGGER AGVVTSGTMS PTLGRAIGLA YVPPETEGGF EVLIRERPVP ARIVPLPFYR
RKRNDPEGGA SG
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