| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3169 |
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| Symbol | |
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| ID | 4114967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3181287 |
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| End bp | 3182879 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638037935 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_645887 |
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| Protein GI | 108805950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGAGA GAAGAGGGCA CCTGTGGTGG CAGCGCGGGG TGGTCTACCA CATCTACCCC
CGCAGCTTCG CCGACGCGAG CGGCGACGGG GTGGGCGACC TCGAGGGCAT CGCCTCCCGC
CTGGACTACC TGGAGTGGCT CGGGGTCGAC GCCATCTGGC TCTCCCCCTT CTACCCCTCC
CCCATGGCGG ACTTCGGCTA CGACATCTCC GACCACTGCG CCGTGGACCC CCTCTTCGGC
ACGCTCGCGG ACTTCGACGA GCTGGTCGCG GAGACGCACC GGAGGGGCAT GCGCCTCATC
GTCGACTACG TCCCCAACCA CACCTCGGAC GAGCACCCGT GGTTTTTGGA GTCCCGCGCC
TCGCGCGAGA GCCCGAGGCG CGACTGGTAC ATCTGGGCCG ACCCGAAGCC CGACGGCTCG
CCGCCCAACA ACTGGCGGAG CGTCTTCGGG GGTTCTGCGT GGGAGTGGGA CGAGAGAACG
GGGCAGTACT ACTACCACGC CTTCCACCGC AAGCAGCCGG ACCTCAACTG GCGCAACCCC
GCGGTGAGGG AGGCGATGCA CGGGGTGATG CGCTTCTGGC TGGAGAGGGG CGTGGACGGC
TTCCGGGTGG ACGCCCTGCG CCACCTCGTA AAAGACGAGA AGCTCCGGGA CAACCCGCCC
AACCCGGCCT ACGAGGAGGG TCGGCCCTCC TACGAGGCCC ATCTCCCCGT CTACACCACC
GACCGCCCGG AGGTGCACCG GATGATCTCC GGGATGCGCC GCGTCCTCGA CGGCTGCGGC
GGGGAGCGGG TGATGATCGG CGAGCTCTAC CTGCCGTTCG ACAGGCTCGT GCTCTACTAC
GGGGAGGGGG GGCGCGGGGT CCACCTGCCG ACGAACATGC ACCTCATCAC GACGCCCTGG
AGCGCCCCCT CCCTCGCCGC CCTCATCTCC GAGTACGAGG CGGCCCTCCC CCCGCACGGC
TGGCCCAACT GGGTCCTGAG CAACCACGAC AACCCCCGCG TCGCCACCCG GGTCGGCCCG
GAGAGGGCGC GGGCGGCCGC CGTGCTGCTC CTCACCCTGC GCGGGACCCC CACGGTCTAC
TACGGCGACG AGATCGGCAT GGTCGACGGG AAGATCCCGC CGGAGCGTCT CCGCGACCCG
GCCGGCTCGC AGAACCCGCG CCTCAGCCGC GACCCGGCCC GCACCCCGAT GCAGTGGGAC
GCCTCCCCGA ACGCCGGGTT CTGCCCGCCG GACGCCGAGC CCTGGCTCCC GCTCTCCCCC
GACCGCCGCC ACCGCAACGT CGCCGCGCAG AGGGAGAGCC GGGGCTCCCT CCTCTGCCTC
TACCGCAGGC TCCTGCGCCT CCGCCGCTCG GAGCCCGCCC TCTCCGTGGG CTCCTACGAG
CCGCTCGAGG CCGGGGGCTC CCTGCTGGCC TACGCCCGCA GCCACGCCGG GCGCCGCCTC
CTCGTCGCCC TGAACCTGGG CGAGGCCCCC GAGCCCCTGC CGCCGGTCCT CCGGGGGCGC
GTCCTGCTCT CCACCTCTCC CGGGCAGGAG GGCGGAGACC TCCGCCCCCC CGCCCGGCTC
GGCCCCGGCG AGGCCCTCGT CGTGGCGCCC TAG
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| Protein sequence | MTERRGHLWW QRGVVYHIYP RSFADASGDG VGDLEGIASR LDYLEWLGVD AIWLSPFYPS
PMADFGYDIS DHCAVDPLFG TLADFDELVA ETHRRGMRLI VDYVPNHTSD EHPWFLESRA
SRESPRRDWY IWADPKPDGS PPNNWRSVFG GSAWEWDERT GQYYYHAFHR KQPDLNWRNP
AVREAMHGVM RFWLERGVDG FRVDALRHLV KDEKLRDNPP NPAYEEGRPS YEAHLPVYTT
DRPEVHRMIS GMRRVLDGCG GERVMIGELY LPFDRLVLYY GEGGRGVHLP TNMHLITTPW
SAPSLAALIS EYEAALPPHG WPNWVLSNHD NPRVATRVGP ERARAAAVLL LTLRGTPTVY
YGDEIGMVDG KIPPERLRDP AGSQNPRLSR DPARTPMQWD ASPNAGFCPP DAEPWLPLSP
DRRHRNVAAQ RESRGSLLCL YRRLLRLRRS EPALSVGSYE PLEAGGSLLA YARSHAGRRL
LVALNLGEAP EPLPPVLRGR VLLSTSPGQE GGDLRPPARL GPGEALVVAP
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