Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3158 |
Symbol | |
ID | 4114957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 3171379 |
End bp | 3172902 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638037925 |
Product | Na+/solute symporter |
Protein accession | YP_645877 |
Protein GI | 108805940 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACAGG ACTGGATGAT AGTAACCGGG ATCACGGTCG CGTACCTGAT CTTCATCCTC CTCATCGGGC TCGGGGCTCG CAGCGCACAG TCTTCTACGC TGGTGGGTTA CGTAGCCGGG GGGCGCGAGA TCGGTCTGCT CATCCTCTTC TTTATCATGG GCGCCGAGAT CTTCAGCGCC TTCACCTTCC TCGGTGCTCC GGGGTGGGCC TACAGCAGGG GCGCACCCGC CTTCTACATC CTGGCGTACG TCACGCTTGG GCTCTTGCCT TGGTGGGTGT TGGGGCCGAG GACGGCCCGG CTGGGTAGGA GGTGCGGATA CCTGACCCAG GCCGATCTGA TGTCGGATCG TTACGACAGC AGATGGCTCT CCGCCATCGT CGCGCTGGTC AGCGTGGGTG CTTTCATCCC CTACCTGACA CTCCAGATCA CGGGCTCCGG ATACCTCTTC GAGTTCGCCA CAGGCGGAAA CGTGCCGTTC TGGCTGGGGG CTTTGGCCGC GTTCGTGGTG GTCACCATCT ACGTCTATGC GAGTGGGCTT AGGGGGATCG GCTGGACCAA CCTGATTCAG GGGATCATCA TGGTGGTGGT CGCTTGGTTC CTGGGAATGG CGGTAGCGAA CCGGTTTTTT GGCGGGGTAG GGCCCATGTT TCAAGAGCTG CGAGATAGGG CGCCGGAGTA CCTGACGCTG CCCGGCGCGG AGGGGCAGGA GATGAGTTGG GCTGCCTTCT CCACGGCCAT CCTGGTCAGT GCTATCGGGT TTACCATGTG GCCGCACCTG TTTATGAAAT CCTATGGAGC CGATAACGAG AGGACGATCA AGAAGACCAT CGTCATCTAC CCGCTGTACG CTTACCTCGT GGTCCCCGTG CTGATCATAG GCTTTGCGGG CGTTCTGGTT CTCCAGGATA ACCCCCTGGA GAACCCGGAC GATGTGCTCC TTGAGCTGGT GGTCAACGTG GCGGACTTCT CGCCGTGGAT TATAGGGATC ATGCTCTCGG GGGCTTTGGC GGCGGCGATG TCCACCGGCT CGAACCTGGC CCACACCGCC GCTACGGTGC TGGTACGGGA TCTCTTCGTC ACGGGGCTCA ACCGCGGGAT GCCGGAGCGT CGGGTGGTCC TGCTCACCAG GGTGTTCGTA GTGGTGATCT CGGTGGTCGC CTACGTACTG GCGCTCTTCA ACCCGGCCAC CCTTGTGGGG CTGCTGCTCG GTGCTTACGG GGCGGTAGTG CAGTTCTTCC CCCTGATCGT GGCCGCGTTC TTCTGGAAGC GGGCGACCAA GGCCGGGGCG TTTGCCGGCC TGATCGGCGG CAGCCTGGTT ATGCTTCTCT TTACGTTCTT CATCACGCCT GCCCCCCTGG ACATTCACGC CGGGATATGG GGGCTGATCG TAAACACGGT CTTGTTGATC GGCGTTAGCC TCGCCACCAC ACCCATGCCC CGCGGGCACG TGGACAGGTT CGTCGAGGGT TCTAAGGCAT CGTTGGACGA CCTTTCCGAG CCCCGGCTCT CGACGGCCCA GTAG
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Protein sequence | MIQDWMIVTG ITVAYLIFIL LIGLGARSAQ SSTLVGYVAG GREIGLLILF FIMGAEIFSA FTFLGAPGWA YSRGAPAFYI LAYVTLGLLP WWVLGPRTAR LGRRCGYLTQ ADLMSDRYDS RWLSAIVALV SVGAFIPYLT LQITGSGYLF EFATGGNVPF WLGALAAFVV VTIYVYASGL RGIGWTNLIQ GIIMVVVAWF LGMAVANRFF GGVGPMFQEL RDRAPEYLTL PGAEGQEMSW AAFSTAILVS AIGFTMWPHL FMKSYGADNE RTIKKTIVIY PLYAYLVVPV LIIGFAGVLV LQDNPLENPD DVLLELVVNV ADFSPWIIGI MLSGALAAAM STGSNLAHTA ATVLVRDLFV TGLNRGMPER RVVLLTRVFV VVISVVAYVL ALFNPATLVG LLLGAYGAVV QFFPLIVAAF FWKRATKAGA FAGLIGGSLV MLLFTFFITP APLDIHAGIW GLIVNTVLLI GVSLATTPMP RGHVDRFVEG SKASLDDLSE PRLSTAQ
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