| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3114 |
|---|
| Symbol | |
|---|
| ID | 4114913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 3124325 |
|---|
| End bp | 3125293 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638037881 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_645833 |
|---|
| Protein GI | 108805896 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGAGG GCAGGAGGAG GGCGCTGGTC ACCGGCGGGG CGGGGTTTAT CGGGAGCCAC
CTCTGCGACC GCCTGGTCTC CGAGGGCTAC GCCGTGGTCT GTATGGACAA CCTCAGGACC
GGCTCCCTGC GCAACATCGC CCACCTGCGC AGCGAGCCGC GCTTCGAGTA CGTCGACCAC
GACGTCACCT CCTACATCCG CGTCCCGGGC AGGCTGGACG AGGTCTACCA CTTCGCCTCC
CCGGCCAGCC CCAAGGACTT CGAGCGGATC CCCATCCCCA TCCTCAAGGT CGGGGCCCTG
GGCACCCACA ACGCCCTCGG CCTCTCGCTC GCCAAGGGGG CCCGCTTCAT GCTGGCCTCC
ACCTCCGAGG TCTACGGCGA CCCCCTCGTC CACCCCCAGC CCGAGGACTA CTGGGGCAAC
GTGAACCCCA TCGGGGTGAG GGGCGTCTAC GACGAGGCCA AGCGCTACGC CGAGGCCATA
ACCATGGCCT ACCACCGCCA CCACGGGCTG GACACCCGCA TCGTGCGGAT CTTCAACACC
TACGGGCCCC GGATGCGCCC CGACGACGGG CGGATGATCC CCAACTTCAT CTCCCAGGCG
CTCTCCGGCC GGCCCCTCAC CGTCTACGGC GACGGTTCGC AGACGCGCAG CGTCCAGTAC
ATCGACGACC TCGTCGAGGG CATCTTCCGC CTGATGCGCA GCGAGGAGCG CCGCCCGGTG
AACATCGGCA ACCCGGTCGA ATACACGGTG CGGGAGGTGG CCGAGCTGGT CCTCCGGCTC
TCCGGGAGCC GGGCCGGTAT CTCCTTCCGC CCCCTCCCCA AGGACGACCC GAAGCAGCGC
TGCCCGGACA TAACCCGCGC CCGCGAGGTG CTCGGCTGGG AGCCGCGGGT GCCCGCGGAA
GAGGGGCTGA GGAGGACGCT AGAATGGTTC TCCGGGCACG TACACCGAGC AGGGGAGAAG
ACCGGATGA
|
|---|
| Protein sequence | MPEGRRRALV TGGAGFIGSH LCDRLVSEGY AVVCMDNLRT GSLRNIAHLR SEPRFEYVDH
DVTSYIRVPG RLDEVYHFAS PASPKDFERI PIPILKVGAL GTHNALGLSL AKGARFMLAS
TSEVYGDPLV HPQPEDYWGN VNPIGVRGVY DEAKRYAEAI TMAYHRHHGL DTRIVRIFNT
YGPRMRPDDG RMIPNFISQA LSGRPLTVYG DGSQTRSVQY IDDLVEGIFR LMRSEERRPV
NIGNPVEYTV REVAELVLRL SGSRAGISFR PLPKDDPKQR CPDITRAREV LGWEPRVPAE
EGLRRTLEWF SGHVHRAGEK TG
|
|---|
| |