Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3057 |
Symbol | |
ID | 4114857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 3064524 |
End bp | 3065390 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638037825 |
Product | hypothetical protein |
Protein accession | YP_645777 |
Protein GI | 108805840 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCCTGA ACCCCACGGC GGGGCGCGGC CGGGCGGCGG CGCTCAGGCC GAGGATCTCG CGGTTCTTCG AGGAGCGGGG GGCGCGCGCC GTCTGGCACG TCACCCGCCG GCCGGGGCAC GCTAGCCAGA TCGTGGGGGA GCTGCCGCCG GGGCTCCCGG CGGTGGCCGT CGGGGGGGAC GGGACGGTGC ACGAGGTGGC GCGGGCCTGC GCCGGCACCG GACGCCCGAT GGGCGTGCTC CCCGCGGGCA GCGGCAACGA CTACGTAAAG GCCCTCGGCG TCGGGGGGGA CCTGCGGCGG GCGATGGAGG TGGTCCTCGC GGGCGAGGCG CGCGCGGTGG ACGCCGGGGA GGTGAACGGC GAGTTCTTCG ACAACGGGCT CGGCATAGGC TTCGACGCCG AGGTCGCCGC CGGCGTGGTC AAGGCCCCGG CCTACCTGGG CGGCGCCGGG CGGTACATGT GGTCCGTGGC CAGGCTGCTG TGGGGCTTCA CCTGCCATCC CGCGCGGCTC TCCTTCGACG ACGGGACGGC GGTGGAATCG GAGACCATCC TGGTGGCGGT CGCGCTCGGC ACCACCTACG GGGCCAGGTT CCGCCTCGCG CCGGAGGCCC GCCTGGACGA CGGGGCGTTC GACGTGGTGT GGTCAGACAG GGTGAGCCGC GCCGAGGTCA TAAGGCTCAT CCCCTCTGCG CTGCGGGGCA CCCTCCTGCG GCACCCCAAG GTTCACATGC ACCGCGCCCG GGAGGTGGAG GTGGAGCTCG GCCGCGTCGT ACCGGCCCAC GTGGACGGCG AGATCCTGCC CCCCACCCGG CTCTTCAGGG CGCGGGTGCT GCCCGGCGCG CTGCGGGTGC TGGCCCCCCG CGGGTAG
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Protein sequence | MILNPTAGRG RAAALRPRIS RFFEERGARA VWHVTRRPGH ASQIVGELPP GLPAVAVGGD GTVHEVARAC AGTGRPMGVL PAGSGNDYVK ALGVGGDLRR AMEVVLAGEA RAVDAGEVNG EFFDNGLGIG FDAEVAAGVV KAPAYLGGAG RYMWSVARLL WGFTCHPARL SFDDGTAVES ETILVAVALG TTYGARFRLA PEARLDDGAF DVVWSDRVSR AEVIRLIPSA LRGTLLRHPK VHMHRAREVE VELGRVVPAH VDGEILPPTR LFRARVLPGA LRVLAPRG
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