Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2819 |
Symbol | |
ID | 4117650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2825735 |
End bp | 2826385 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638037589 |
Product | putative transcriptional regulator |
Protein accession | YP_645543 |
Protein GI | 108805606 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCGGTGT ATTTGGACGA GAGGTTCTTC CGGAGCACGC GCGGGCGCAT CGTCGTGTTG TTGCGGCGGG CGAGCCGCAG GGTCGACGAG CTTGCGCGGG AGCTCGGGCT CACGGACAAC GCGGTCCGGG CGCACTTGGC TGCGCTGGAG CGCGACGGCG TCGTACGGCA GGGTGGCACC GTACGCCGGG GCAGGGGTGC GGGCAAGCCG GCGCACGTGT ACGAGCTAAC GCCGGAGGCC GAGGGGATGT TCTCGAGGGC CTACGAGCCC GTGCTGAGCC GGCTTTTGGA TGTGCTGGTC GAGGAGATGG GCCGTGAGGG GGAAGAGGAG CTGTTGAGGG AGGCGGGCGT GCGCGTGGCG GCCGACTTCG GGGTGTTCTC GGGCAGCGTC CGGGAGAGGC TTGAGGCGGC CGTTGGCGCG CTCAACGAGC TCGGGGGTTT CGCCGAGCTC GTTGAGGAGG AGGGTTCCTT TCTCATCCGC GGCCACGGTT GTCCGCTGAG CGGTGTGGTT TCGGGCCACC CGGAGGCGTG CCGGCTGGCC GAGGCGCTGG TCTCCGGGCT GGCGGGCGTG AAGGTCCATG AGCGCTGCGA GCGCGGCGGG AGCCCCCGCT GTCGCTTCGA GGTGGTGCCT GGCGAGGCCG GCGGGGGTTA G
|
Protein sequence | MAVYLDERFF RSTRGRIVVL LRRASRRVDE LARELGLTDN AVRAHLAALE RDGVVRQGGT VRRGRGAGKP AHVYELTPEA EGMFSRAYEP VLSRLLDVLV EEMGREGEEE LLREAGVRVA ADFGVFSGSV RERLEAAVGA LNELGGFAEL VEEEGSFLIR GHGCPLSGVV SGHPEACRLA EALVSGLAGV KVHERCERGG SPRCRFEVVP GEAGGG
|
| |