Gene Rxyl_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2776 
Symbol 
ID4117317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2788230 
End bp2788769 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID638037548 
ProductHNH endonuclease 
Protein accessionYP_645502 
Protein GI108805565 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.228269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCTCA ATGCCAGCTA CGAGCCCGTG GCGCTGGTTC CGGTCAAGCG GGCCATCGTT 
CTGGTTGTCA CCGAGAAGGC CGAGATCGTC GAGGCCAACC TTGAGCGGCG CTTCCGCTCC
GAGAAGGCCG AGTACCCCTA CCCGCTCGTC ATCCGGCTCG TGAAGTACGT CGAGATCCCG
CGGCGGCTGC GGCGGCACGT CACCAACACC ATCCTCTTCG CCCGCGACGG CTACCGCTGC
CAGTACTGCG GGCGGCACAA GAGCGAGCTG GGCCGGCGGG AGTGCCTGAC CCGGGACCAC
GTCAAGCCCC TCTCGCGCGG CGGGGGCAAC AGCTGGGACA ACGTGGTCAC CGCCTGCACG
CGGTGCAACG CCCGCAAGGG CGACCGGCTC CCGATGGAGT GCGGGATGTA CCCCAGGAGC
ACCCCCAAGG AGCCGCGCTA CGTGGTGATG GTGTGGTACT CGCGGGGGCT CAACGAGATC
CAACGCCGCT ACGTCGAGCA GTTCTACGGC GAGCCGCTCG CCGGGGAGGC CACCGCCTGA
 
Protein sequence
MTLNASYEPV ALVPVKRAIV LVVTEKAEIV EANLERRFRS EKAEYPYPLV IRLVKYVEIP 
RRLRRHVTNT ILFARDGYRC QYCGRHKSEL GRRECLTRDH VKPLSRGGGN SWDNVVTACT
RCNARKGDRL PMECGMYPRS TPKEPRYVVM VWYSRGLNEI QRRYVEQFYG EPLAGEATA