| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2766 |
|---|
| Symbol | |
|---|
| ID | 4117307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2777545 |
|---|
| End bp | 2778576 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638037538 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein |
|---|
| Protein accession | YP_645492 |
|---|
| Protein GI | 108805555 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG TGTTGGTGGC GGTCCCCCTC GGGCAGGAGA GCCTGCGCAG GATCCGGGAG
GCAGACCCCC GGGTGAGGGT CGTCTACAGG GAGGAGCTCG TCCCGCCGCC CCGGTGGGAG
GGGGACCTGG TGGGCGAGCC GGGGTGGCGG CCGGGCCCGG AGGAGGAGCG GGAGCTGCTC
GAGCTGCTCG CCGGGGCCGA GGTGCTCCTG GACTTCCCCA AGATCCGAAG GCCCCTGCCG
GAGGTCGCGC CCCGGCTGCG CTGGGTGCAG GGGAGCATGG CCGGGGCAGG GCCGGTGGCC
GCCCGGGCCG GGCTGCTCGA CACCGACGTG GCAATCACCA CCGCCAGCGG CGTCTTCTCC
AACCCGCTCG CCGAGTTCGT GCTCGGGGGG ATGCTCCACC ACGCCAAGGA CTTCGAGCGG
CTGCGCAGGA ACCGGCTGGC CCGCCGGTGG AGCGAGGAGC CCACCGGGAC CCTCGAGGGC
AAGACCCTGT GCATCGTGGG GATGGGGAGC ATCGGGCGGG CCATCGCCGC GCGGGCGAAG
CCCTTCGGGA TGCGCATCGT CGGCGTCAAG CGCACCGTTC GCCAGGACGA CCCGGCGTGG
GAGCACGCCG ACGAGCTGCT CCCGGTCGGG AAGCTGCGCG CGGCGCTCTC CAGCGCCGAC
TACGTGGCGC TCACCCTCCC CCACACCCCG GAGACGGAGC GACTGTTCGA CGAGGAGACC
ATAGCCGCCA TCAAGCCCGG GGCCTACTTC GCCAACGTGG GGCGCGGGGC GGTGGTGGAC
GAGGCGGCGC TCGTGCGGGC GCTCCGGAGC GGCCGCCTCT CCGGGGCGGC GCTGGACGTC
TTCGAGACCG AGCCGCTCCC GCGGGAGAGC CCACTCTGGG AGCTGGAGAA CGTCATCATA
AGCCCCCACT CCACGGACAA CGTGCCCCGG CTCATGGAGG AGAAGCTCGT GGGGCTCTTC
TGCGAGAACC TGCGGCGCTA CCTGGCCGGG GAGGAGCTGA TCAACGTGCT GGACAAGCGC
CTGCTCTACT AG
|
|---|
| Protein sequence | MTTVLVAVPL GQESLRRIRE ADPRVRVVYR EELVPPPRWE GDLVGEPGWR PGPEEERELL
ELLAGAEVLL DFPKIRRPLP EVAPRLRWVQ GSMAGAGPVA ARAGLLDTDV AITTASGVFS
NPLAEFVLGG MLHHAKDFER LRRNRLARRW SEEPTGTLEG KTLCIVGMGS IGRAIAARAK
PFGMRIVGVK RTVRQDDPAW EHADELLPVG KLRAALSSAD YVALTLPHTP ETERLFDEET
IAAIKPGAYF ANVGRGAVVD EAALVRALRS GRLSGAALDV FETEPLPRES PLWELENVII
SPHSTDNVPR LMEEKLVGLF CENLRRYLAG EELINVLDKR LLY
|
|---|
| |