| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2724 |
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| Symbol | |
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| ID | 4114823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2737300 |
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| End bp | 2739843 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037497 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_645451 |
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| Protein GI | 108805514 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.820534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCCA ACATGGCCGA GAACCACCCG GTGGGCTTCC AGTGGGTGAT GGAGGCCCGC
CTGCGGGGGG CGAAGGTGAT GCACGTGGAC CCGCGCTTCA CCCGCACCAG CGCCACCGCC
CACCTGCACG TCCCCATCCG GGCCGGCACC GACATCGCCT TTCTGGGCGG GCTGGCGAAC
TACATCCTCC AGAACGAGCG CTACTTCAAG GAGTACCTCG TCCACTACAC CAACGCCCCC
GTGATCGTCG GCGAGAAGTT CGCCGACACC GAGGATCTGG ACGGGCTCTT CTCCGGGTGG
GACCCGGAGA CGAACTCCTA CGACGTCTCG ACCTGGCAGT ACGAGGGGCT CCAGGTGAGC
GCCGCCGCCG GCAAGCGCGA GATGGGCGGC GCCACCGGCG AGCAGGCCCA CTACGCCCAG
GCCGGCGAGC TGGAGGCGGG CGAGCCGCCG GCCATCGACG AGACGCTCCG GCACCCGCGC
TGCGTCTTCC AGCTCCTCAA AAAGCACTTC CGGCGCTACA CCCCGGAGAT GGTGGAGCGG
ATCTGCGGGT GCCCCAAGGA GCAGTTCCTC GAGGTCGCCG AGACCCTCTG CCAGAACTCG
GGGCGCGAGA AGACCTCCGC CTTCGTCTAC TCCGTCGGCT GGACCCAGCA CACCGTGGGC
GTCCAGAACA TCCGGGCGGC CTCCATCGTC CAGCTCCTCC TGGGCAACAT CGGGCGGCCC
GGCGGGGGCA TCCTGGCGCT CAGGGGCCAC GCCTCCATCC AGGGCTCCAC GGACATCCCC
ACCCTCTACA ACATCCTCCC CGGCTACATC CCCATGCCCC ACGCCCACGC CCACACCAGC
CTCGACCTCT TCGTCGAGCG CAACAGCGCC GGGGCCGGCT ACTGGGGCAA CCTGCGCGCC
TACATGGTCA GCCTGCTCAA GGCCTACTGG GGAGAGGCGG CCACCGGGGA GAACGACTTC
TGCTTCGACT ACCTGCCCCG CCTCACGGGG GACCACTCCA TCTACCCCGC GATCATGGGG
ATGGTCGACG GCCGGGTGAA GGGGTTCTTC GTGATGGGCG AGAACCCCGC CGTCGGGGCG
GCGAACGGCA AGCTGCAGCG GCTCGCGCTC GCCAACCTCG ACTGGCTGGT GGTGCGGGAC
ATGACCGAGG TGGAGACCGC CTCCTTCTGG TACGACGCCC CGGAGATAGA GACCGGCGAG
CTCAAGACGG AGGAGATAAA GACCGAGGTC TTCTTCCTCC CCGCCGCCTC CCACGTGGAG
AAGGAGGGCT CCTTCACCAA CACCCAGCGC CTGCTGCAGT GGCGGGAGAA GGCGGTCGAG
CCCAAGGGCG ACTGCCGCTC CGATCTGTGG TTCATGTACC ACCTGGGGCG CAGGATCCGG
GAGAAGCTCG CCGGCTCCAC CGACCCCAAG GACCGCCCGG TGCTCGACCT CGCCTGGGAT
TACCCCACCG AGGGCGAGAT AGAGGAGCCC AGCGCCGAGG CCATCCTGCG CGAGATAAAC
GGCTGGGACG CCCGGGGCAG GGCCCTCTCC GGCTACACCG AGCTCAAGGA CGACGGCTCG
ACGGCGTGCG GCTGCTGGAT CTACTGCGGC GTCTACGCCG ACGAGGTCAA CCAGGCCAAC
CGCCGCAAGC CCGGCTCCGA GCAGAGCTGG GTCGCCCCCG AGTGGGGCTG GGCGTGGCCG
ATGAACCGGC GCATCATCTA CAACCGGGCC TCCGCCGACC CCCAGGGGCG GCCCTGGTCC
GAGCGCAAGA AGTACGTCTG GTGGGACGGG GAGCACAAGC GTTGGGTCGG CCACGACGTC
CCGGACTTCC AGGCGGACAA GCCCCCGGAC TACGTCCCCC CAGAGGGGGC GCGCGCTGAG
AAGGCCATCC GCGGCGACAA GCCCTTCATC ATGCAGGCCG ACGGGCGGGG CTGGCTCTAC
GTGCCCGCCG GGCTGGTGGA CGGCCCCTTC CCCACCCACT ACGAGGCCCA CGAGTCGCCC
TTCGAGAACC CCCTCTACCG GCAGCGCTCC AACCCGGCCC GCCAGCAGTT CCCCCGGCCG
GACAACCCGT ACAACCCCTC CGGCTCGGAG GCCTTCCCCT GCGTGCTCAC CACCTACCGG
CTCACCGAGC ACCACACCGC GGGCGGGATG ACCCGCACCG TGCCCCACCT CTCGGAGCTG
CAGCCCGAGA TGTTCTGCGA GGTCTCCCCG GAGCTGGCCG AGGAGCGCGG CCTGCAGAAC
GGCGGGTGGG CCACCATCGT GACCTCCCGC ACCGCCATAG AGGCCCGGGT GCTCGTCACC
GACCGGCTGG CCCCGCTGAA GGTCCAGGGC AGGGTCGTCC ACCAGGTGGG GCTGCCCTAC
CACTGGGGCA GCAAGGGGCT CGTCACCGGC GACTCGGCCA ACGACCTGCT GGGGCTCGCG
CTCGACCCGA ACGTCCACAT CGGCGAGTAC AAGACCGCCA CCTGCGACAT CCGGCCCGGC
CGCAGGCCGC GCGGCGCGGC CCTCCTGAGG CTCATCGAGG ACTACCGCCG GCGGGCTTCT
AGAAACGGAG GAGGAGCAAC TTGA
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| Protein sequence | MGSNMAENHP VGFQWVMEAR LRGAKVMHVD PRFTRTSATA HLHVPIRAGT DIAFLGGLAN
YILQNERYFK EYLVHYTNAP VIVGEKFADT EDLDGLFSGW DPETNSYDVS TWQYEGLQVS
AAAGKREMGG ATGEQAHYAQ AGELEAGEPP AIDETLRHPR CVFQLLKKHF RRYTPEMVER
ICGCPKEQFL EVAETLCQNS GREKTSAFVY SVGWTQHTVG VQNIRAASIV QLLLGNIGRP
GGGILALRGH ASIQGSTDIP TLYNILPGYI PMPHAHAHTS LDLFVERNSA GAGYWGNLRA
YMVSLLKAYW GEAATGENDF CFDYLPRLTG DHSIYPAIMG MVDGRVKGFF VMGENPAVGA
ANGKLQRLAL ANLDWLVVRD MTEVETASFW YDAPEIETGE LKTEEIKTEV FFLPAASHVE
KEGSFTNTQR LLQWREKAVE PKGDCRSDLW FMYHLGRRIR EKLAGSTDPK DRPVLDLAWD
YPTEGEIEEP SAEAILREIN GWDARGRALS GYTELKDDGS TACGCWIYCG VYADEVNQAN
RRKPGSEQSW VAPEWGWAWP MNRRIIYNRA SADPQGRPWS ERKKYVWWDG EHKRWVGHDV
PDFQADKPPD YVPPEGARAE KAIRGDKPFI MQADGRGWLY VPAGLVDGPF PTHYEAHESP
FENPLYRQRS NPARQQFPRP DNPYNPSGSE AFPCVLTTYR LTEHHTAGGM TRTVPHLSEL
QPEMFCEVSP ELAEERGLQN GGWATIVTSR TAIEARVLVT DRLAPLKVQG RVVHQVGLPY
HWGSKGLVTG DSANDLLGLA LDPNVHIGEY KTATCDIRPG RRPRGAALLR LIEDYRRRAS
RNGGGAT
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