Gene Rxyl_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2624 
Symbol 
ID4115319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2643957 
End bp2645633 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content75% 
IMG OID638037397 
Producthypothetical protein 
Protein accessionYP_645353 
Protein GI108805416 
COG category[S] Function unknown 
COG ID[COG5298] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.377848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGGCC GGCGTTCTCG GTTAGCCCTC CGGCTGCTCC CGGCGCTCCT CCTCCTGGCG 
GGGCTCTTCC TCACGCTGCC CGCGGGCGAC GCGCGGGCCC GCGCCGGGGA GGGTCCCCCG
AGCGTCCTCC TGATCAACCA GCGCTCCCCG CAGTGGCCCC GGGCCGCCGA GCGGATGGGC
CTGCAGGTGC AGATGCTGCT CCGGCACTTC ACCCCGAGGA CCGTCACAAT CTCCCCGGAG
CGGTACGCGC CAGGCATGAT CTCCCGCTAC GACCGGGTCG TGGTGGTCGG CAACGACGCC
CTCGAGCCCC TGCCTCCCGC GCTGCTGCGC GACCTCGAGC GTCCCGGCCG CCCGGTCATG
TGGCTGGGGC ACGGCCTAGG ACGGCTCTCC CCGGGCTCCT CCGGCTTCTC CGCGGAGGGC
CCGGCGCCCG GCGGCTCCCT CCGGTGGGTC CGCTACTGCG GGGAGCGCTA CCCCGCCGCC
CCCGGAGAGG TCCGCCGCAT CCGCGTCTCC TCCCCCGGGG TCCGGGTGCT CGCCAGCTAC
GAGGGCGGCC GGGAGCCGGT GCCGTACATC CTGCGCGGCG GCGACCTCTG GTACGTGAAC
GGCCTGCCCT CCTCGAGCTC CGCCTACCCG GACCCGGAGC GCGACGCCCC GCTGCTCGTC
CTCGCCGACG TTCTGCACGA CTTCCTCGGC GTCCTCGGCC ACGGGCCGCG GCGGGCGGTC
ATCCGGCTGG AGGACGTCTC CGTCCACGTC CCGCCGGAGA GGATCATCCG CATCGCCGGC
TACCTGCACG AGCACCGGGT CCCGTTCGCG GTGGGGGTCA TCCCCGCCCA GCGCTTCGAG
GACGGCAGCG TGGTGGAGCT CTCCGAGAGG CCGGAGCTCG TGCGGGCGCT GCGCTACGCC
CAGGAGCGCG GCGGGACCGT CGTCTTGCAC GGCTACCACC ACACCTTCGG CAGCGGCGAG
GACTACGAGT TCTGGGACGA GAGGCGCGAC GCCCCCATCG CCGGGGAGAC CCACGCCATG
TACGCCCGCA AGCTGGAGGA CGGCATCCGC ATCCTGCGCG ACAACGGCCT CGAGCCGCGC
CTGTGGGAGA CCCCCCACTA CGCGGCCTCC CCGCTCGCCT ACCGCGTCTT CTCGGGCTAC
TTCTCGCACG CCATAGAGAC CCGCGACCCG GTGGGGTGGC TGCCCTACCC CTCGGGCCCC
GACCCGTACG GGCAGACGCT CATCCCCGAG AACCTCGGCT ACATAGCGCC GGAGGAGGGG
CTCACCGTGG AGGACCAGCT CGCACGCGCC CGGCTGCTGC GGATCGTCCG CGACGGCTGG
GCGGTCGGCT TCTACCACCC GGCGAGCGTC CCCCCCTCGG AGCTTGAGAG GCTCGTCGAA
GGGCTGCGCG CCCAGGGCTA CGCCTTCGCC GACCTGCGGG AACTGCCCGC CGAGGTCCGC
TACGGCTACC GCCCGGGGCC GCTCGAGCGG ATGGAGAGCT GGCTGACCTC CGGTCCCTGG
CTGGCGCTCA TGCGGCTGGA CGACGCGCTG GAGGGGAGCC TCCCCTGGTG GCCCGCCGTG
CGCCGCGCGC CGTGGTCCGC GCTGCTGCCG GCGGCGGCCG CCGCCGCGCT CCTGCTCCGG
CTGCGGGGCC AGTGGCGCTC TGCGGGGAAG CCCCTCCGGC GGGGAGGGGC CGGGTGA
 
Protein sequence
MVGRRSRLAL RLLPALLLLA GLFLTLPAGD ARARAGEGPP SVLLINQRSP QWPRAAERMG 
LQVQMLLRHF TPRTVTISPE RYAPGMISRY DRVVVVGNDA LEPLPPALLR DLERPGRPVM
WLGHGLGRLS PGSSGFSAEG PAPGGSLRWV RYCGERYPAA PGEVRRIRVS SPGVRVLASY
EGGREPVPYI LRGGDLWYVN GLPSSSSAYP DPERDAPLLV LADVLHDFLG VLGHGPRRAV
IRLEDVSVHV PPERIIRIAG YLHEHRVPFA VGVIPAQRFE DGSVVELSER PELVRALRYA
QERGGTVVLH GYHHTFGSGE DYEFWDERRD APIAGETHAM YARKLEDGIR ILRDNGLEPR
LWETPHYAAS PLAYRVFSGY FSHAIETRDP VGWLPYPSGP DPYGQTLIPE NLGYIAPEEG
LTVEDQLARA RLLRIVRDGW AVGFYHPASV PPSELERLVE GLRAQGYAFA DLRELPAEVR
YGYRPGPLER MESWLTSGPW LALMRLDDAL EGSLPWWPAV RRAPWSALLP AAAAAALLLR
LRGQWRSAGK PLRRGGAG