Gene Rxyl_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2584 
Symbol 
ID4115045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2603340 
End bp2604221 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID638037356 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_645313 
Protein GI108805376 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00518726 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGGCT TTCTTCTGCA GCAGGTACCG GAGATACCGC TCGAGGGCTG GGTTGAGTCC 
TTTGTGGACT TCATCACCTC CGAGACCTTC GAGGGCTTCT TCGACGCGCT GGAGGGCTTT
CTCAACCTCC TGGTGGACGT TCTGGAGGCG GGGCTCACCT TTCTGCCGCC GCTGGTGATG
GTCGCCGTCT TTGCTGGCCT GGCCTGGCTG GTCTCCAGCT GGCGAATTGC TCTGCTCACG
GCGGCGGGGC TTCTGCTCCT GCAGGGGCTC AGGCTCTGGG AGGACGCGAT GCTCACGCTG
GCGCTGGTCA TCGCGGCCAC GGCGGTGGCG CTTGTGGTGG GCATCCCGCT GGGCATAGTT
GCGGCCAAGT CCAGGGGCGT CGAGACGGTG CTGCGCCCCG TTCTGGACTT CATGCAGACC
ATGCCCGCCT TTGTGTATTT GGTGCCGGCC ATCGTGCTGC TCGGGCTTGG GGCCGCTCCT
GCTCTGGTTG CGGTCGTCAT CTTTGCGATG CCGCCGGCGG TGCGGCTGAC CATGCTCGGG
CTGCAGCAGG TCTCGAAGGA GACGGTTGAG GCGGCGAGCG CCTTTGGGGC CACGGGCTGG
CAGACGCTGA GGAAGGTGGA GCTGCCCCTT GCGATGCCCA CGATCATGGC GGGGGTGAAC
CAGGTGATCA TGCTCTCGCT CTCCATGGTG GTTATAGCGG CGCTCATCGG GGCCGGGGGG
CTCGGAGAGG AGGTCTACCA GGGGCTCTCG CAGCTCGATG TGGGCAAGAG CTTCAAGGGA
GGGCTCGGCA TCGTGATCAT CGCCATCCTC CTCGACAGGA TCACGCGGAA CATAAGAGGC
GGAGGGGCGC AGAAGGCGGG CTCCGGGATA AAGACCGCCT GA
 
Protein sequence
MLGFLLQQVP EIPLEGWVES FVDFITSETF EGFFDALEGF LNLLVDVLEA GLTFLPPLVM 
VAVFAGLAWL VSSWRIALLT AAGLLLLQGL RLWEDAMLTL ALVIAATAVA LVVGIPLGIV
AAKSRGVETV LRPVLDFMQT MPAFVYLVPA IVLLGLGAAP ALVAVVIFAM PPAVRLTMLG
LQQVSKETVE AASAFGATGW QTLRKVELPL AMPTIMAGVN QVIMLSLSMV VIAALIGAGG
LGEEVYQGLS QLDVGKSFKG GLGIVIIAIL LDRITRNIRG GGAQKAGSGI KTA