| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2466 |
|---|
| Symbol | |
|---|
| ID | 4115308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2481236 |
|---|
| End bp | 2482888 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638037247 |
|---|
| Product | carboxyl transferase |
|---|
| Protein accession | YP_645205 |
|---|
| Protein GI | 108805268 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCTCTC CGGGACCTCA TTCTACTACG CAGCACCGCG CAAAAACGCC GGGGGCCGCC
GTGCTAGAAT CCTCCTTCAT GCAGGGTGAG AGGCTCGGCG AGGAGAGCAC CGCCGGAAAG
CTGGCGGGGC TCGGGAGGCT GCGGGAGGCG GCGGCGCACC CGTCCTCCGA GGAGGCCGTC
CGGAGGCAGC GGGAGCGGGG CAAGCTCACC GCGAGGGAGC GCATAGAGCT GCTGCTCGAC
CCCGGCACCT TCGTGGAGCT CGACCGCTAC CGGGTCCACC GCTCGCACAA CTTCGGCATG
GACGCCAGGA AGCCGCTCGG CGACGGGGTG ATCACGGGCT ACGGCGAGAT AGACGGGCGC
AGGGTGTGCG TCTTTTCCCA GGACTTCACG GTCTTCGGGG GCTCCCTGGG GGAGGTCTTC
GCCCAGAAGA TCTGCAAGGT GATGGACCTC GCGCTCTCCA CCGGCTGCCC GATCGTGGGG
ATAAACGACT CCGGCGGGGC GCGCATCCAG GAGGGGGTGC TCTCGCTGGC CGGGTACGCG
GAGATCTTCC ACCGCAACGT GCGGGCCTCG GGGGTGGTGC CCCAGATCAG CGTGATCCTG
GGCCCCTGCG CGGGCGGGGC GGTCTACTCC CCCGCGATAA CCGACTTCAT CTTCATGGTG
GAGGGCACGA GCCACATGTT CATCACCGGG CCGGACGTCA TCCGGGCGGT GACCGGGGAG
GAGGTCTCCT TCGAGGAGCT GGGCGGGGCG GCGACGCACA ACGCCAGGTC TGGGGTCGCC
CACTTCTCCG CCCCCGACGA GGAGAGCTGC CTCTCCGACG TGCGCTACCT GCTCTCCTTT
CTGCCCGAGA ACAACCTGGA GAGCCCGCCG TACTTCGAGC CCGCCGACGA CCCGGAGCGG
ATGGAGGAGG GCCTGGCCAC CCTCATCCCC GACTCTCCGC AGCGGCCCTA CGACATGCGC
GAGGCGATCC GGATGGTGGT GGACGGGGGG GAGTTCTTCG AGGTGCAGGA GGCCTGGGCC
CAGAACCTCG TGGTGGGCTT CGCCCGGCTC GGCGGACACG CCGTGGGCGT GGTGGGCAAC
CAGCCCGCCG TGCTGGCGGG CACGCTAGAC ATAGACGCGA GCGTCAAGGG GGCGCGCTTT
GTGCGCTTCT GCGACGCGTT CAACATACCG CTTTTGACCT TCGTGGACGT CCCCGGCTTC
ATGCCGGGCA CCGACCAGGA GTGGGGCGGG ATCATCCGCC ACGGCGCCAA GCTCCTGTAC
GCCTTCTCGG AGGCCACCGT GCCCAAGATG ACGGTCATCA CGCGCAAGGC CTACGGCGGG
GCCTACGACG TCATGAACTC CAAGCACATC GGGGCGGACG TGAACGTGGC GTGGCCGACC
GGCGAGATAG CGGTGATGGG CGCGCCGGCG GCGGTGAACA TCATCTTCCG GCGCGAGATC
GCCGAGGCCG AAGACCCGGA GGCGAAGCGC CGGGAGCTTA TCTCGTCCTA CGAGAAGCAG
TTCAACAACC CCATGGTCGC CGCCGAGATG GGCTACCTGG ACGACATCAT AGACCCGCGC
GAGACGCGCC CCTACCTGAT ACGGGCGCTC TCGATGGTCG AGAGCAAGCG CCCGGAGCGG
CCGCCGAGAA AGCACGGGAA CATACCGCTT TGA
|
|---|
| Protein sequence | MFSPGPHSTT QHRAKTPGAA VLESSFMQGE RLGEESTAGK LAGLGRLREA AAHPSSEEAV
RRQRERGKLT ARERIELLLD PGTFVELDRY RVHRSHNFGM DARKPLGDGV ITGYGEIDGR
RVCVFSQDFT VFGGSLGEVF AQKICKVMDL ALSTGCPIVG INDSGGARIQ EGVLSLAGYA
EIFHRNVRAS GVVPQISVIL GPCAGGAVYS PAITDFIFMV EGTSHMFITG PDVIRAVTGE
EVSFEELGGA ATHNARSGVA HFSAPDEESC LSDVRYLLSF LPENNLESPP YFEPADDPER
MEEGLATLIP DSPQRPYDMR EAIRMVVDGG EFFEVQEAWA QNLVVGFARL GGHAVGVVGN
QPAVLAGTLD IDASVKGARF VRFCDAFNIP LLTFVDVPGF MPGTDQEWGG IIRHGAKLLY
AFSEATVPKM TVITRKAYGG AYDVMNSKHI GADVNVAWPT GEIAVMGAPA AVNIIFRREI
AEAEDPEAKR RELISSYEKQ FNNPMVAAEM GYLDDIIDPR ETRPYLIRAL SMVESKRPER
PPRKHGNIPL
|
|---|
| |