Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2452 |
Symbol | |
ID | 4115521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2465606 |
End bp | 2466358 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037232 |
Product | short chain dehydrogenase |
Protein accession | YP_645191 |
Protein GI | 108805254 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCCGC GCCGGAACAT CCTCATCACC GGCGCGAGCT CCGGCCTCGG GTGGGGGATG GCCCGCGAGT TCGCCGCCCG GGGCCGCAAC CTCGCCCTCT GCGCCCGCCG CCTCGACCGG CTCGAGGGGC TCAGAGAGGA GCTCGCGGCG CGGTACCCCT CCCTCCGCGT CGCCGTCCGC CGGCTCGACG TGAACGACCA CGAGGAGGTC TTCCGCGCCT TCCGCGAGCT GGACGCCGGG CTCGGCGGGC TCGACCGCGT GGTCGTGAAC GCCGGGCTCG GCAAGGGCCG GCCCCTCGGG ACCGGCCACT TCCGGGCGAA CCGCGAGACG ATCGAGACGA ACCTCGTCGC GGCCCTGGCC CAGTGTGAGG CGGCGATGGA GCTCTTCCGC GAGCGAAACG CCGGACACCT GGTCGTGATC TCCTCGGTCG CCGCCGTGCG GGGGCTCCCG GGGAACATGG GCGCCTACTC GGCCTCGAAG GCCGGCCTCG CCGCGCTCGC CGAGGGCCTC CGCGCCGACG TCCACGGCAC CCCCATCCGG ATCAGCACGA TCTTCCCGGG CTACGTCCGC ACGGAGATGA ACGAGCGGGC GGGCAGGATG CCGTTCGCGG TCGGCGAGGA GAAGGGCTCG CGCCTGCTCG CCGAAGCGAT AGAGCGCGAG CCCCGGAGGG CCTACGTTCC CTTCTGGCCC TGGCGACCCC TCAGCCTCTT TCTGCGCTTT CTCCCGGAGG GCTGGCTGGC GAGGGTCTCG TAG
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Protein sequence | MPPRRNILIT GASSGLGWGM AREFAARGRN LALCARRLDR LEGLREELAA RYPSLRVAVR RLDVNDHEEV FRAFRELDAG LGGLDRVVVN AGLGKGRPLG TGHFRANRET IETNLVAALA QCEAAMELFR ERNAGHLVVI SSVAAVRGLP GNMGAYSASK AGLAALAEGL RADVHGTPIR ISTIFPGYVR TEMNERAGRM PFAVGEEKGS RLLAEAIERE PRRAYVPFWP WRPLSLFLRF LPEGWLARVS
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