| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2358 |
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| Symbol | |
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| ID | 4115643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2368675 |
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| End bp | 2370303 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638037138 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_645098 |
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| Protein GI | 108805161 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.594651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGGC TCACCATGGA CTACCAGCTC ACCCTGCCGG CCGTCCTGAA GCGGGCGGAC
CAGCTCTTCG GGCGCAAGGA GATCGTCACC CGCAGGCCGG ACAAGAGCTT CCACCGCTAC
ACCTACGCGG ACTTCGTCCG CCGGGCCAAG AAGCTCGCGG TCGCCCTCGG CGGGCTCGGC
CTGCAGAAGA GCGACCGGGT CGCCACCCTC GGCTGGAACA CCTACCAGCA CCTGGAGGCG
TACTTCGGGG TCCCCTCAGC CGGTCTCGTG CTGCACACCC TAAACCCCCG CCTCCCCGCC
GACGAGCTGG CGTACATCAT CGACCACGCC GGGGACAGGG TGCTCCTGGT CGACGAGACC
ATGGTCCGGC TGCTGGACGG CTTCAGGGAC AAGGTAAACC TGGAGCACGT CTTCGTCTTC
ACCTACTCCC CCGAGGGGGA GGTGCCGGAG GGGCTGCGGG GCTACGAGGA GCTGCTCCAG
GAGGCCGACG AGGGCGACTT CGCCTACCCG GACCTCGACG AGCGGGACGC GGCCGCCATG
TGCTACACCT CCGGGACCAC CGGCAGGCCC AAGGGCGTGC TCTACAGCCA CCGCTGCATC
TGCCTGCACT CGCTCATCAC CTCCGTGGCC GAGGCCTTCG GCCTCTCCGA GGCGGACTCC
GTGCTCCCCG TGGTCCCCAT GTTCCACGTC AACGCCTGGG GCATCCCCTT CGCGGCCACC
ATGCACGGGG CCAAGCAGGT CTTCCCGGGC CCCCACCTCG ACCCGCAGAG CCTGCTCGAG
GACTTCGAGC AGGAGAAGGT CACCTTCACC GCCGGGGTCC CCACCGTCTT CCTCGGCATC
CTGCGCGAGC TGGACAGGCA GCCCGGCAGG TACGACCTCT CCAGCCTCAA GGCCATGGGC
ATCGGCGGCT CGGCGGCGCC GGAGGGGATG ATCCGGGGCT TCAGGGAGCG CCACGGGCTC
ACCGTGCTGC ACGCCTGGGG GATGACCGAG ATGGCGCCCG TGGGGACCGC CGGGCACCTC
ACCAGCGACC TGCTGCAGGA GCCGGAGGAC GTGCAGTACC GCTACCGGGC CAAGCAGGGC
ATCCCGCTGC CGTTCATCGA GATCCGGGCC CGCGGCGCGG AGGGGCTGGT GCCCTGGGAC
GGCAGGACCA TGGGCGAGCT GGAGGTCCGC GGCCCGACGG TCGCGAGCTC CTACTACGAG
GCCCCCGAGG CGGCGGACAA GTTCACCGAG GACGGCTGGT TCCGCACCGG GGACATCGTC
ACCATAGACG AGCGGGGCTA CATCGAGATC CGCGACCGCG ACAAGGACCT GGTCAAGAGC
GGGGGGGAGT GGATCTCCTC GGTCGAGCTG GAGAACGCCC TCATGGGACA CCCGGCCGTC
GCCGAGGCCG CGGTCATCGC GGTCCCCCAC CCCAAGTGGC AGGAGCGGCC GCTCGCCGTG
GTGGTGCTCA AGGAGGGCGA GAGCGCAACG CCCGAGGAGC TGATCCAGTC CATCGCCCCC
AGGTTCGAGA AGTGGCAGCT GCCGGACGCC GTGGAGTTCG TGGACGAGAT CCCGAAGACG
GCGACCGGCA AGTTCCTGAA GACCCGCCTG CGCGAGATGT TCAAGGACTA CCAGCTCGCA
AAGAGCTAG
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| Protein sequence | MQGLTMDYQL TLPAVLKRAD QLFGRKEIVT RRPDKSFHRY TYADFVRRAK KLAVALGGLG
LQKSDRVATL GWNTYQHLEA YFGVPSAGLV LHTLNPRLPA DELAYIIDHA GDRVLLVDET
MVRLLDGFRD KVNLEHVFVF TYSPEGEVPE GLRGYEELLQ EADEGDFAYP DLDERDAAAM
CYTSGTTGRP KGVLYSHRCI CLHSLITSVA EAFGLSEADS VLPVVPMFHV NAWGIPFAAT
MHGAKQVFPG PHLDPQSLLE DFEQEKVTFT AGVPTVFLGI LRELDRQPGR YDLSSLKAMG
IGGSAAPEGM IRGFRERHGL TVLHAWGMTE MAPVGTAGHL TSDLLQEPED VQYRYRAKQG
IPLPFIEIRA RGAEGLVPWD GRTMGELEVR GPTVASSYYE APEAADKFTE DGWFRTGDIV
TIDERGYIEI RDRDKDLVKS GGEWISSVEL ENALMGHPAV AEAAVIAVPH PKWQERPLAV
VVLKEGESAT PEELIQSIAP RFEKWQLPDA VEFVDEIPKT ATGKFLKTRL REMFKDYQLA
KS
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