| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2233 |
|---|
| Symbol | |
|---|
| ID | 4115184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2243219 |
|---|
| End bp | 2244853 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638037020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_644983 |
|---|
| Protein GI | 108805046 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02987] type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGC GTAACTCGAA AGACTTGTTA ACTAGGGCTA CCGGACGTTT TTATACTCAT
GAGTTCATCG GGCGACGCCT AGCGGATGTG GTCGTGCGGA CAGCCCAACT GGAGGGCCGC
CGTTCAGTCA GCGTGATCGA CCCGTTCTGT GGCGACGGCC GGCTTATCGG CTGGTTCCTT
GAGGCTGTCT CAAAGAGAGA CGGGGCGCGT CCGCGGATGT GGAGCGTCGA GCTCTGGGAC
TGCGACGCAG CGGCGCTCGA CACAGCGAGA AAGCGGGTGC TTGAGACAGC TGCTCAGCTC
GGCGTGGAGG TCGAGGTAGA AACTGTCCTA GGCGACACCT TTGCTCACGC TCCGAGTCGC
TTCGGAGAGT TCGTGGTGTG CCTCACTAAT CCACCGTGGG AGCTCCTCAA GCCTGACCGT
CGGGAGCTAG ACCAGCTCGA CGAGGACGTT GCCAGAGAGT ACGTGGCGCA ACTCCGGCAG
CAGAGTTCGA GGCTAGTCGA GTATTATCCG CTGTCGGCAC CCCGACGTAG ATATGCGGGG
TGGGGCATGA ACTTGGCCAG AGCAGGTACG GAGGTGGCTT TGCGACTCAC CGCCAACGAT
GGTGTGTGCG GTGTGGTGTC CCCGGCATCG CTCCTAGCGG ATCAGATGTC CGAGTCCTTG
CGCCGCTGGG TATTCGAAGA ATATGTGGTG CACGACATCG CCTACTACGT GGCAGAGGCG
AAGCTCTTCG ATGAGGTGGA TCAACCTAGC GTGACACTAG TCGTGTCCCC AGGCGTCACG
AGTCATAGCC CTACAATGCT TGTCGTTCAC GATCGAGCTC TCCGGGGTAA AGAGGTGCGC
TTCAGTGAGC AAGAGTGGCA CTCTCTCCGG TCAGACGGTT ATGTCTTCCC TCTGCAGTTC
GGGCCAGAAC TGCTGGGACT CCGGTCGAAG TGGGACAACC TACCAAGCTT CGCGGATCTT
GAGGGAGAGT CACAAGACGA TCTTTGGGCT GGTCGTGAGT TGGATGAAAC TGGTCACAGG
CGCTTCCTTG GCGACAAAGG AGACTACCTC TTCGTCAAAG GACGTATGGT GAGTCGCTTC
AGGATGTGCG AAGCTCCGAG CCAATACGTT AATCGCGACG GGCCTCGTAT TCCATCTTCA
GCGGATCACT ACCGACTCGC GTGGCGCGAC ATCTCGCGAC CTAACCAGAG ACGCAGAATC
CAAGCCGCTA TAGTTCCTCC CGGTATGGTC ACAGGTAACT CACTGCATGT CGCTTACTTC
AGGGACGACG ACCTTGAGAG ACTGAAGGCC CTCCTTGCGG TTATGAACTC CTTCGTCTTT
GAGGCTCAGG TACGCATGCG CTTAGCCACG GCTCACGTCT CGCTCGGCGT GGTCAGAAAG
GCCCGTGTAC CACCGTTAAA TGACAGGGGC CTAACGGCCG AGCTTGCTCA ACTGGTGGCC
CGCTGCGAGA AAGGTGACGA GGAGGCACTT ACCACAGTAG AGGTGCGGGT GGCCCAGTTA
TACGGGTTGT CACACGAGGA CTTCGCGCTC CTACTCTCGG CGTTCGAGAA GGTAGAGGAG
GAAGAGAAGA GGGCCTTGCT CACTAGCCCC GCCTGGCGCT GTCCCTCTGT AGGCTCACAG
CAACTCGCGA GGTGA
|
|---|
| Protein sequence | MRKRNSKDLL TRATGRFYTH EFIGRRLADV VVRTAQLEGR RSVSVIDPFC GDGRLIGWFL
EAVSKRDGAR PRMWSVELWD CDAAALDTAR KRVLETAAQL GVEVEVETVL GDTFAHAPSR
FGEFVVCLTN PPWELLKPDR RELDQLDEDV AREYVAQLRQ QSSRLVEYYP LSAPRRRYAG
WGMNLARAGT EVALRLTAND GVCGVVSPAS LLADQMSESL RRWVFEEYVV HDIAYYVAEA
KLFDEVDQPS VTLVVSPGVT SHSPTMLVVH DRALRGKEVR FSEQEWHSLR SDGYVFPLQF
GPELLGLRSK WDNLPSFADL EGESQDDLWA GRELDETGHR RFLGDKGDYL FVKGRMVSRF
RMCEAPSQYV NRDGPRIPSS ADHYRLAWRD ISRPNQRRRI QAAIVPPGMV TGNSLHVAYF
RDDDLERLKA LLAVMNSFVF EAQVRMRLAT AHVSLGVVRK ARVPPLNDRG LTAELAQLVA
RCEKGDEEAL TTVEVRVAQL YGLSHEDFAL LLSAFEKVEE EEKRALLTSP AWRCPSVGSQ
QLAR
|
|---|
| |