| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2210 |
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| Symbol | |
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| ID | 4117443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2222986 |
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| End bp | 2224494 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638037001 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_644965 |
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| Protein GI | 108805028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCCTGA GCCGCCGCCG CAAGATCCTC GTAACCCTCG CCACCCTCAT CGGGACGTTC
CTGGCCGCCC TGGACTCCAC GGTGGTGGGG ACGGCGATGC CCACGGTCAT AGGGGACCTC
GGCGGGCTCG GCCTGTACCC CTGGGTCTTC GCCTCCTACC TGCTGGCCGC CACGGTCACC
GGGCCTCTCT TCGGGAGGCT CTCCGACGCC TACGGGCGCA AGCCGGTCTA CCTCGCCGGG
GTCTCGCTCT TTCTGCTCGG GAGCGTCCTG TGCGGGACGG CGGGGAGCAT GGGCGCCCTG
ATCGTCTACC GGACCATCCA GGGGCTCGGG GCCGGGGCGG TGCAGCCGGT CGCGGTGACC
ATCGTCGGGG ACATCTTCGA GCTGGAGACC CGGGCACGCA TCCAGGGGCT CTTCGGCGCG
GTGTGGGGGG TCTCCGCTGT AGTCGGACCG GCGGCCGGCG GCCTGATCAC GGACTACCTC
TCCTGGCGCT GGGTGTTCTA CGTGAACGTG CCCTTCGGCC TGGCCGCCGG AGCGCTCCTG
GCCCTCGCGC TGCGCGAGAG CTTCGAGCGC CGCCCCGGGC GGGCGGACTA CCCGGGGGTC
TTCCTGCTCA CGGGCGGGCT CCTCGCGGTG CTGCTCGCCG TGCTGGGGGC GGGAAGCCTT
CTGGCGGACC TCGCCCTGTT GGCCGGCGGG GCCTCGGCGC TCGCGCTCTT CGTGCTCGCC
GAGGCCCGCG CCCCGGACCC GATCGTCCCG CTGGAGCTCT TCCGGGAGCG GCTCTTCGCC
GTCGCCTCCG CGGGGAACGC CGCGCTCGGC GGGGTACTGC TCGGGGTCTC GGTATATGTC
CCACTGTACG TGCAGGGCGC TCTGGGCGGC ACGGCCCTCA CCGCCGGGAC GGTCGTCGCC
CCGCTCTCCA TCGGCTGGCC GGTGGGCTCT TTCGTGGGGG GCAGGATGCT CCTCCGGGCG
GGCTACAGGA CCACGCTGCT CGTGGGGTCG GCCTTCGTGG TGGCGGGCTC CGCGATGTGC
CTCGCGCTGG ACGCCGCGAC GCCGCTCGCG TACGTGATCC TCTCCGTCTT CGTCATAGGG
CTCGGGATGG GCTTCTCCAG CACGAGCTAC CTGGTCAGCG TCCAGAACGC GGTCCCCTGG
CACCGCCGCG GGATCGCCAC CTCCTCCGTG GTGTTCTTCC GCACGATCGG CGGCTCGCTC
GGGGTGGCGG TGATGGGGGC GCTCCTGGAC CTCTCGCTGG GGGAGCGCTA CCGGGCGGCG
GTGGAGCGGG CCGCGGGGGA GAACGGGGCG CTGGCCCGGC TCCTCTCGGA CCCGAACGCC
CTGCTGCAGC CCGCGCTGCG GGCCAAAATC CCCGAGGGCG CCTACGGGGA GCTCGCCTCC
GCGCTCGCCT CGGCGCTCTC CCCGGCGTTC TGGGCGGTCG CCGTGATGGC CGTGGCGGCG
CTCGCCGTCT CAGCGCTCTT CCCGGCGGGC AGGGCTGAGG ACTTCGTGAA GCGGGAGCCC
CGCCCGTGA
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| Protein sequence | MGLSRRRKIL VTLATLIGTF LAALDSTVVG TAMPTVIGDL GGLGLYPWVF ASYLLAATVT
GPLFGRLSDA YGRKPVYLAG VSLFLLGSVL CGTAGSMGAL IVYRTIQGLG AGAVQPVAVT
IVGDIFELET RARIQGLFGA VWGVSAVVGP AAGGLITDYL SWRWVFYVNV PFGLAAGALL
ALALRESFER RPGRADYPGV FLLTGGLLAV LLAVLGAGSL LADLALLAGG ASALALFVLA
EARAPDPIVP LELFRERLFA VASAGNAALG GVLLGVSVYV PLYVQGALGG TALTAGTVVA
PLSIGWPVGS FVGGRMLLRA GYRTTLLVGS AFVVAGSAMC LALDAATPLA YVILSVFVIG
LGMGFSSTSY LVSVQNAVPW HRRGIATSSV VFFRTIGGSL GVAVMGALLD LSLGERYRAA
VERAAGENGA LARLLSDPNA LLQPALRAKI PEGAYGELAS ALASALSPAF WAVAVMAVAA
LAVSALFPAG RAEDFVKREP RP
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