| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2196 |
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| Symbol | |
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| ID | 4117430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2211506 |
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| End bp | 2212978 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036988 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_644952 |
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| Protein GI | 108805015 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.800961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACCA CAACCGCGGG GCTTCTGTCC CTCTTGGTTC TGGCCGTCGC CGGGGTGTGC
GCCTCCGGGG CGCCGGCGGG GGCGCAGCAG GGCGCGCTGG AGCAGGAGTT CCGGGCGGCC
GCCGCCGAGT ACGGGGTGCC GGCTGAGCTC CTCAAGGCGA TGGGCTACGT GAACACCCGC
TGGGAGATGC CCCCCGAACA GAGCAGGGAC GGCGGGTGGG GCATAATGCA CCTGGTGCGC
AACAACACCA CGGACACCCT GGGGGAGGCC TCCCGGATCA CCGGCATCCC CGTGCAGCGG
CTCATGACCG ACAGGGCCGC GAACATCCGC GGCGGGGCGG CGCTGCTCGC GCAGGCCCAG
CAGGGCAGCC CCGAAGACCT CAACGCCTGG TACGAGGCGG TCGCCGAGGT CGGGGGCGGC
AGGCTCTACG CCAACCAGGT CTACGAGACG CTGCAGAGCG GCGCCAGCGC GACCATCTCC
ACCGGGGAGA CCGTGAGCCT CGCTCCCCAC AGCGGCGCGA GCCCGCAAGG GGTGCTCTCC
AGCCAGAGCA GCGCCGACTA CCCCGGCGCC ATCTGGTACC CGGCCTCCTC CAGCAACTAC
ACCGCCGCGA ACAGGCCCTC CTCGCACCCC ATAGACAAGA TCGTCATCCA CGTCACCCAG
GGCTCCTACG CCAGCGCCAT GAACTGGTTC CAGAACCCCG GCGCGGGCGT CTCCGCGCAC
TACACCGTGC GCTCGGCCGA CGGCGTCATC GGCCAGAGCG TGCGGGAGAA GGACATCGCC
TGGCACGCGG GCAACTGGGA GTACAACCAG ACCAGCATCG GCATCGAGCA CGAGGGCTTC
GTCGACGACC CCAAGTGGTT CACCGAGGCC ATGTACCAGT CCTCGGCCAG GCTGGTCGCC
TACCTGTGCA AAAAGTACGA CATCCCCATA GACAGGCAGC ACATCATCGG GCACAGCGAG
GTGCCCGGGG CCGACCACAC CGACCCCGGC CCCTACTGGG ACTGGGACAA GTACCTCGCC
TACGTCCGCC AGTACGCCGG GGGGAGCTCC GGCGGGTACC GGCAGGTGGT GGACAACGCG
GACATCATAA CCTCGGGGAG GTTCAGCGCC TCCTCGGGCT GGGGCTGGAG CCGCTACAGC
GACTCCCGCT ACTACTGGAA CTACCGCTTC GCCAGGCCCA AGGCGGTGAG CGACACGGCG
AAGTACCGCT TCGACATACC GGCCACCGGC GACTACGCAA TCTACGCCTG GTGGCCCTCC
AACCCCGGCT ACAACCGGGC TACCCCCATC GGCATAAAGA CCACCGCCGG TTGGCGCTGG
GTGTGGGTGG ACCAGACCCG AAACGGCGGG CGCTGGGTCT ACCTCGGCAC CTTCAACCTC
TCCGAAGGCG ACGAGTGGAA GGTGCAGGTC TCCCGCTGGA CCTCGGGCAG CGGTTACGTG
ATAGCCGACG CGATGAAGGT GGTGCGAAGA TGA
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| Protein sequence | MRTTTAGLLS LLVLAVAGVC ASGAPAGAQQ GALEQEFRAA AAEYGVPAEL LKAMGYVNTR
WEMPPEQSRD GGWGIMHLVR NNTTDTLGEA SRITGIPVQR LMTDRAANIR GGAALLAQAQ
QGSPEDLNAW YEAVAEVGGG RLYANQVYET LQSGASATIS TGETVSLAPH SGASPQGVLS
SQSSADYPGA IWYPASSSNY TAANRPSSHP IDKIVIHVTQ GSYASAMNWF QNPGAGVSAH
YTVRSADGVI GQSVREKDIA WHAGNWEYNQ TSIGIEHEGF VDDPKWFTEA MYQSSARLVA
YLCKKYDIPI DRQHIIGHSE VPGADHTDPG PYWDWDKYLA YVRQYAGGSS GGYRQVVDNA
DIITSGRFSA SSGWGWSRYS DSRYYWNYRF ARPKAVSDTA KYRFDIPATG DYAIYAWWPS
NPGYNRATPI GIKTTAGWRW VWVDQTRNGG RWVYLGTFNL SEGDEWKVQV SRWTSGSGYV
IADAMKVVRR
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