| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2128 |
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| Symbol | |
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| ID | 4114724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2154305 |
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| End bp | 2155246 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638036914 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_644884 |
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| Protein GI | 108804947 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0389171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTGG ATGTGGCACC TCCCCGTTTC AGGGTGGAGG AGGAAGACGA GAGGCACGGC
ATCTTCGTCG CCGAGCCGCT CCCGCGGGGT CTGGGGCATA CTTTGGGCAA CGCGCTGCGG
CGGGTGATGC TCTCCGGGCT GCCCGGGGCG GCGGTGACCA AGCTCAGGAT AGAGGGCGTC
CAGCACGAGT TCTCGACCAT CGAGGGTGTG CGCGAGGACG TGGTGGACAT CATCCTCAAC
GTAAAGCAGC TGAAGTTCCG CCTGGAGCGG GACGAGCCGA TAGAGCTGCA GATCTCGAAG
GACGGCCCGG GCGAGGTGCG CGGCTCGGAC ATCGAGCTGA AGGCCGATGT GGAGGTGGTC
AACCCCGACG CCTACATCGC AAGCCTCTCC GAGGGCGGGC ACCTGGACAT GACCCTGACC
GTGGAGCGCG GGCAGGGCTA CGTCCCGGCC GAGCAGAACA AGAGCGACGC CGACCCCATC
GGGGTCATAG CCGTCGACTC GCTGTTCTCG CCGGTCGAGA AGGTGCAGTA CAGGGTCTCG
GAGACCCGCG CCGGGGCGCG GGTGGACCTC GACGCCCTCA CGCTGGAGGT CTTCACCGAC
GGGCGGCTCG GCCCGCGGGA GGCGCTCCGG GAGGCCTCCC GCAAGCTCAT AGACTTCTTC
GGGCTCTTCG CGGAGGGCTA CCAGGGGGCC GGCGCCGCCG AGGAGCCGGG CCGGAGCGGC
GGCCGCCCCG TCATCACCGA CGAGCGCCCC ATAGAGGATC TGGAGCTCAC CGTCCGCTCC
TACAACTGCC TCAAGCGCGA GGGGGTGGAC ACCATCGGGC AGCTCGCCAC GATGACCGAG
GAGGAGCTGA TGAACATCCG CAACCTCGGC ATGAAGAGCG TGGACGAGAT CCGCTCGAAG
CTGGAGGAGT ACGGCTACAC CCTGGAGAGT GGTAGGGAAT GA
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| Protein sequence | MMLDVAPPRF RVEEEDERHG IFVAEPLPRG LGHTLGNALR RVMLSGLPGA AVTKLRIEGV
QHEFSTIEGV REDVVDIILN VKQLKFRLER DEPIELQISK DGPGEVRGSD IELKADVEVV
NPDAYIASLS EGGHLDMTLT VERGQGYVPA EQNKSDADPI GVIAVDSLFS PVEKVQYRVS
ETRAGARVDL DALTLEVFTD GRLGPREALR EASRKLIDFF GLFAEGYQGA GAAEEPGRSG
GRPVITDERP IEDLELTVRS YNCLKREGVD TIGQLATMTE EELMNIRNLG MKSVDEIRSK
LEEYGYTLES GRE
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