Gene Rxyl_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2125 
Symbol 
ID4114721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2152255 
End bp2153073 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content77% 
IMG OID638036911 
ProductABC transporter related 
Protein accessionYP_644881 
Protein GI108804944 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0679248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCTGG AGCTGCGGGA GGTCCGGCAC GTCTACGCCC CCGGCACGCC GCGGGAGGTG 
GAGGCGCTGC GGGGGGTCTC CCTCGGCGTG GAGCCCGGCG AGGTGCTGGG GGTGGTGGGG
GGCACCGGCT CCGGGAAGAG CACCCTCGCC CAGCACATGA ACCTCCTGCT CGAGCCCACC
TCCGGGCGGG TGCTCGCCGA CGGCCGGGAC GCGCGCGCGA TGCCGCGCCC GGAGCTGCGC
CGCAAGGTCG GGCTGGTCTT CCAGTTCCCG GAGGCGGCCC TGTTTGCGGC GACGGTCGGG
GAGGACGTGG CCTTCGCCCC GCGCCGGATG GGGCTCGCCG AAGAGGAGGT GCGGCGGCGG
GTGCGCCGGT CGCTCGAGCG GCTCGGGGCG CTGCACCTCG CCGGGCGCTC GCCGCACGCC
CTCTCGGGCG GCGAGAAGCG CCGGGTGGCC ATAGCCGGGG TCCTGGCCAT GGAGCCGGAG
GTGCTGGTGC TCGACGAGCC CACCGCCGGG CTCGACCCGG CGACGCGCGA GGAGCTGCTG
GGCGCGGTCC TCGGGATGCG GGGGGAGGGG AGGTCCGTGG TCTTCATCTC GCACGACCTG
GACGAGGTGG CGGAGGTGGC AGACAGGGTG TGCCTGCTGG AGGCGGGCAG GGTGCTGGCC
TGCGGGAGGC CGGAGGAGGT GTTCTACGAG CACCCGGAGA CCGCCCCCGC CGCGGTGCGG
GTGGCGCGCG AGGTCCGGCG GGAGCACCCG CGGGTGGGGC GCCCGGTGCG CTTCGGAGAG
GTGCGGGAGG CCCTGCGGGG GCTGCTCTCG GGGGGATGA
 
Protein sequence
MRLELREVRH VYAPGTPREV EALRGVSLGV EPGEVLGVVG GTGSGKSTLA QHMNLLLEPT 
SGRVLADGRD ARAMPRPELR RKVGLVFQFP EAALFAATVG EDVAFAPRRM GLAEEEVRRR
VRRSLERLGA LHLAGRSPHA LSGGEKRRVA IAGVLAMEPE VLVLDEPTAG LDPATREELL
GAVLGMRGEG RSVVFISHDL DEVAEVADRV CLLEAGRVLA CGRPEEVFYE HPETAPAAVR
VAREVRREHP RVGRPVRFGE VREALRGLLS GG