| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2025 |
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| Symbol | |
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| ID | 4115915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2050904 |
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| End bp | 2053435 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638036813 |
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| Product | DNA polymerase I |
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| Protein accession | YP_644784 |
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| Protein GI | 108804847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGGCT CGCGCGGTAT AATCGCTTAC CGGATGCGTG TGTACCTGAT CGACGGCTAC
TCGCTGCTCT ACCGGGCGTT CTACGCGCTA CCCCAGAGCA TAGCGACCTC CAGCGGGCTC
CCCACGAACG CCCTCTACGG CTTCACCAGC ATGGTCCTCA AGCTTCTGGA CTCCGACGAG
GAGCTCGGCA TCGGGGTGGT GTGGGACGGG GGGCTTCCGG CCTTCCGGAC GGAGGTCTAC
CCGGAGTACA AGGCCCAGCG GAGCGCCATG CCCGAGGAGC TGAGGGTGCA GCTGGACCAT
CTGGACGAGA TCCTCGAGGC CATGAACATC CCGGTGGTCC GGGTGGAGGG CTTCGAGGCG
GACGACGTGC TGGCCACCGT CTCCCGCCGG CTTCCCGAGG GGGTGGAGCT GTACATCGTC
ACCGGGGATC AGGACGCGAT GCAGCTGGTG GACGGGCGGG TGCGGGTGCT GCGGACCACC
CGCGGGGTCT CGGAGACGAA GGTCTACGGC CGGCGGGAGG TCATGGAGGA GTACGGGGTG
AGCCCGGAGC AGATCCCGGA CTACAAGGCC CTCGTGGGCG ACCCCTCGGA CAACATCCCG
GGGGTGAGGG GCATCGGGCC GAAGAGCGCT GCGGCGCTCC TGCGGCGGTT CGGCTCGCTG
GAGGCGCTCT ACGAGCGCCT GGAGGAGGTG GAGGCCAGGG GCACCCGCCG GAAGCTGGAG
GAGGGGCGCG AGAACGCCTT TCTCTCGCTG CGGCTCGCCC GCATGCGCTT CGACGCCCCG
GTGCAGTTCG ACCCGGAGCG GCTGCGCTTC AGGGGTGTGG CGCCCGGGGT GCGGGACGTC
CTGCTCCGGC GCTACGAGTT CAGGAGCCTC GAGCCGCGCA TAGCCGGTCT CCCGGTGAGC
GGCGGCGGGC GCCCGCAGCC GGAGAGCGCG GTGCGGGTCG TGGAGGGGGA GGTCGAGCCC
TCCCTGGAGC CGGTGGCCGT CGCCCCCGCC GGGGACGGGC GGTGGTGCGC GGCGGTGGCC
GACGACGAGG TCCGGCTGGC GGGCGGGCTG CCGGAGCGGC CGCTGCAGGT GCACGACGCC
AAGGGGGTTG GGGTGCGGGG GGCCCACTTC GACACCTACC TCGCGGGCTA CCTCGCGAAG
CCCGGGCTGG GCAGCTACGA CCTCGACGCG CTGGCCACCG AGCGGGGTAT CTCCGACGTC
GAGGCCAGCC ACGCGGACCC GGTGGTGCGG GAGGCCGCCC GGCGGGCGGC GCTGGTGCGC
GCGCTCGCCC CGCGGCTCGA CGCGGAGCTC CGGGAGATGG GGCTCTCACG GCTCTACTAC
GAGGTGGAGC TGCCGCTCGC CGACGTGCTC GCCGAGATGG AGCGGGTGGG GATGCCGGTC
GACGCCCGGA CGCTGGAGGA GGTGGGCCGC GAGATAGAGC GGCGCATCGC GGAGCTGGAG
GAGGCCATCT TCGAGGACGT CGGCCACCCG TTCAACATAG GCTCGCCCAA GCAGCTCTCC
GAGGTGCTCT TCGAGGAGCT CGGCCTCCCC CCCGTGCGCC GCACCAAGAC CGGGTACTCC
ACCGACGCCA AGGTCTTGCA GCAGCTCGCG CTCGAGCACC CCATAGCCGA GAGGATCATC
GCCTGGCGCG AGCTGGCCAA GCTCAAGGGG ACCTACGTGG AGGGGCTGCT CAAGCTCGTC
GGGGAGGACG GCAGGATCCA CACCACCCTC AACCAGACCA CCACGGCGAC CGGCAGGATC
TCCAGCGACT CCCCCAACCT GCAGAACATC CCGGTGCGCA CCGAGACCGG GATGCGCATC
CGGGACGCCT TCACCGCCTC CCCGGGGCGG CTGCTGGTCG TCGCCGACTA CTCGCAGATA
GAGCTCAGGA TCCTGGCCCA CATGAGCCGG GAGCCCGCGC TGGTGGAGGC GTTCAAGAAC
GGCGAGGACA TCCACACCCG CACCGCCGCC GAGGTCTTCG ACGTCCGGCC GGAGAGCGTG
ACCCCCGAGC TGCGGCGCCG GGCCAAGATG GTGAACTTCG GCATCCTCTA CGGCATCTCC
GGCTACGGGC TCGCCACCCG GCTGGGCAAC GTCCACCCCG CGGAGGCCGA CCGCTACATC
CAGCGCTACT TCGAGCGCCA CCCCAGGGTG ACCGAGTTCA TCCGCAAGAG CCTCGCCGAG
GCCGAGGAGC TCGGGTACGC CACGACCCTC TTCGGGCGCA GGCGCTACGT CCCCGAGCTG
CGCAACAAGA ACAAGAACGT CAGGAAGCTC GGGGAGCGGA TAGCCTTCAA CGCCCGGGTG
CAGGGCAGCG CCGCCGACAT CATAAAGGTG GCCATGGTGG ACCTCGCCCC CCGTCTCGGG
CCCCTCGGGG CCGACATGCT CATGCAGGTG CACGACGAGC TGGTCTTCGA CGTGGACCGC
GACAGGGTGG AGGAGGTCGC CGCCCTCGCC GCAGAGAGGA TGGTCGCCGC CTACGACCTC
GACCCGCCGC TTGAGGTGGA GGTCAAGGCC GGGGAGCGGT GGGGGCGTGT CAAACCGCTG
GGGGGCGGGT AG
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| Protein sequence | MGGSRGIIAY RMRVYLIDGY SLLYRAFYAL PQSIATSSGL PTNALYGFTS MVLKLLDSDE
ELGIGVVWDG GLPAFRTEVY PEYKAQRSAM PEELRVQLDH LDEILEAMNI PVVRVEGFEA
DDVLATVSRR LPEGVELYIV TGDQDAMQLV DGRVRVLRTT RGVSETKVYG RREVMEEYGV
SPEQIPDYKA LVGDPSDNIP GVRGIGPKSA AALLRRFGSL EALYERLEEV EARGTRRKLE
EGRENAFLSL RLARMRFDAP VQFDPERLRF RGVAPGVRDV LLRRYEFRSL EPRIAGLPVS
GGGRPQPESA VRVVEGEVEP SLEPVAVAPA GDGRWCAAVA DDEVRLAGGL PERPLQVHDA
KGVGVRGAHF DTYLAGYLAK PGLGSYDLDA LATERGISDV EASHADPVVR EAARRAALVR
ALAPRLDAEL REMGLSRLYY EVELPLADVL AEMERVGMPV DARTLEEVGR EIERRIAELE
EAIFEDVGHP FNIGSPKQLS EVLFEELGLP PVRRTKTGYS TDAKVLQQLA LEHPIAERII
AWRELAKLKG TYVEGLLKLV GEDGRIHTTL NQTTTATGRI SSDSPNLQNI PVRTETGMRI
RDAFTASPGR LLVVADYSQI ELRILAHMSR EPALVEAFKN GEDIHTRTAA EVFDVRPESV
TPELRRRAKM VNFGILYGIS GYGLATRLGN VHPAEADRYI QRYFERHPRV TEFIRKSLAE
AEELGYATTL FGRRRYVPEL RNKNKNVRKL GERIAFNARV QGSAADIIKV AMVDLAPRLG
PLGADMLMQV HDELVFDVDR DRVEEVAALA AERMVAAYDL DPPLEVEVKA GERWGRVKPL
GGG
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