Gene Rxyl_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2005 
Symbol 
ID4117593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2026679 
End bp2027680 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID638036793 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_644764 
Protein GI108804827 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGTAC GTATAGGGAT AAACGGCTTC GGCCGGATCG GGATGCTCGT GGCCAAGGCG 
GCGATGCAGC GCGGCGACGT GGAGGTCGTC GCGGTGAACG ACCTCATGCC GATGGAGAGC 
CTCGCGCTGC TCTTCAAGCG CGACTCCACC CACGGCATCT GGGACGAGGA CGTGGCCCTG 
GAGGGCAGCG TCCTGCGCGT GGGGGACCGC CAGATAAAGA CCTTCTCCGA GCGCGAGCCC 
TCGGGCATAC CCTGGGGGGA CGTGGGGGCC GACATCGTCG TCGAGGCCAC CGGCAAGTTC 
ACCAGCCGCG ACGGCGCCGC CGGGCACCTG GAGGGCGGGG CCAAGAAGGT CGTCATCAGC 
GCCCCGGCCA AGGGCGCCGA CGCCACCTTC GTCTACAAGG TCAACCACGA GACCTACGAC 
CCGGACAACC ACCAGGTGGT CTCCAACGCC AGCTGCACCA CCAACTGCAT CATCCCGATG 
GTCAAGGTGT TGCAGGACAA CTTCGGCATC GAGAGCGGCT TCATGACCAC CTGCCACGCC 
TACACCAACG ACCAGAGCCT GCTGGACGCG GCGCACAAGG ACCCCCGGCG GGCCAGGAGC 
GCCCCCAACA ACATCGTACC CACCTCCACC GGCGCGGCCC GGACGGCCGG CGTGATCTAC 
CCCGAGCTGC GGGGCAAGGT CGACGGCATG GCCCTGCGGG TGCCGGTGCC GGACGGCTCG 
ATCACGGACT TCGTCGCCGA GCTCTCGCGG GAGGCGAGCG TGGAGGAGGT GAACGGGGCG 
TTCCGGCGGG CCGCCGAGGG CGAGCTCTCC GGCATCCTGG AGTACTCCGA GGCCCCCATC 
GTCTCCCAGG ACATCGTGGG CAACCCGGCC AGCTGCATCT TCGACGCCCC GCTGACGATG 
TCCACCGGCC GCACGGTCAA GGTGCTCGGC TGGTACGACA ACGAGTGGGG CTACTCCAAC 
CGCACGGTGG ACCTGGTCTC CTACATCGGC GAGCGGCTCT AG
 
Protein sequence
MAVRIGINGF GRIGMLVAKA AMQRGDVEVV AVNDLMPMES LALLFKRDST HGIWDEDVAL 
EGSVLRVGDR QIKTFSEREP SGIPWGDVGA DIVVEATGKF TSRDGAAGHL EGGAKKVVIS 
APAKGADATF VYKVNHETYD PDNHQVVSNA SCTTNCIIPM VKVLQDNFGI ESGFMTTCHA 
YTNDQSLLDA AHKDPRRARS APNNIVPTST GAARTAGVIY PELRGKVDGM ALRVPVPDGS 
ITDFVAELSR EASVEEVNGA FRRAAEGELS GILEYSEAPI VSQDIVGNPA SCIFDAPLTM 
STGRTVKVLG WYDNEWGYSN RTVDLVSYIG ERL