Gene Rxyl_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1979 
Symbol 
ID4115732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2000152 
End bp2001420 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content73% 
IMG OID638036765 
Productglutamyl-tRNA reductase 
Protein accessionYP_644738 
Protein GI108804801 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.001246 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATC GTTCGGCCCC GGTAGAGGCG CGCGAGAGGG TGGCCTTCGC GCCGTGCGCG 
GCCCGCTCCT TCCTGCGGCG GCTGCGGGAG GAGGACGGGG TCCCCGAGGC GGTGCTGCTC
TCCACCTGCA ACCGCACCGA GCTCTACGTG GTGGCCGAGG CGGAGCCGGC GCGCGACCGC
CTGCTGGGGC TGCTGGCCGA GGACCGGGGG GTGGAGCCGG GCTCGCTCTA CCGGGACACC
TACTGGCACA CCGACGCGGA GGCCGTGCGG CACCTTTACA GGGTCTCGGC CTCGCTGGAC
TCCATGGTGG TGGGGGAGGC CCAGATCCTG GGCCAGGTGC GGGACGCCTA CCGGATGGCC
ACCGAGGAGC GGTGCACCGG CCCCGTGCTG AACAGGCTCT TTCACACCGC GCTGCGGGTC
GGCAAGAGGG TCCGCGCCGA GACCGGCATC GGGGACAGCT CGCTCTCGGT GCCCCACGTG
GCGGCCAAGC TCGCCGGCGA GGTCTTCGGG TCGCTGGAGG GGCGGCGGGC GCTGGTGCTG
GGGGCCGGGG AGATGAGCGA GCTCCTCGTC CGGCACCTCA GGGACCGGGG GGTCGCGGAG
ATCCGGATAG CCAACCGGAC CCGCGAGCGG GCCGAGCGGC TCGCCGCGCT CTTCGGCGGG
CGGGCGGCGG ACCTCGGCGA CCTCCCGCGC GAGCTGGCGC GCGCGGACAT CGTGGTCAGC
TCCACCGGCT CCGGGGAGTG GGTCATCCGC GGCCCGGAGG TCGCGGCCGC GCTGGAGTCG
AGGGAGGAGC CGCTGTTTCT CATAGACATC GCGGTGCCCA GGGACGTCGA CCCGGTGGTG
CAGAGCATCG AGGGGGCCTT TCTGTACGAC ATAGACGACC TGCAGGCCGT CGTCGAGCGC
AACGCCGAGG ACCGGCAGGA GGCCGCCGCG GCGGCGGAGG AGATGATCGG GCCCGCGGTC
GTGGAGTTCA TGAGCTGGCT CAGCACCCTG CACGTCGCGC CGCTCATCAA GGAGCTGCGC
GACGGGGCCG AGCGGATCCG GCGGCACGAG GTCTCCCGGG CGCTGAGGAA GATGGACCTC
TCCCCGGAGC AGGAGGAGGC CGTGGAGAGG ATGAGCCGCT CGATCGTCAA CAAGCTGCTG
CACGGCCCCA TCTCGGAGAT AAAGGCCCGC GCCGGGGCCG GCGACCCCCT GGACAGCGCC
GAGGTCCGGC GGCGGCTCCT CTCGCTGCGC GGCCCCGGCG TAGAGCTGCA CCCCTCCAGA
GAGCCCTGA
 
Protein sequence
MSHRSAPVEA RERVAFAPCA ARSFLRRLRE EDGVPEAVLL STCNRTELYV VAEAEPARDR 
LLGLLAEDRG VEPGSLYRDT YWHTDAEAVR HLYRVSASLD SMVVGEAQIL GQVRDAYRMA
TEERCTGPVL NRLFHTALRV GKRVRAETGI GDSSLSVPHV AAKLAGEVFG SLEGRRALVL
GAGEMSELLV RHLRDRGVAE IRIANRTRER AERLAALFGG RAADLGDLPR ELARADIVVS
STGSGEWVIR GPEVAAALES REEPLFLIDI AVPRDVDPVV QSIEGAFLYD IDDLQAVVER
NAEDRQEAAA AAEEMIGPAV VEFMSWLSTL HVAPLIKELR DGAERIRRHE VSRALRKMDL
SPEQEEAVER MSRSIVNKLL HGPISEIKAR AGAGDPLDSA EVRRRLLSLR GPGVELHPSR
EP