| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1875 |
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| Symbol | |
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| ID | 4115553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1901726 |
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| End bp | 1903105 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638036663 |
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| Product | major facilitator transporter |
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| Protein accession | YP_644637 |
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| Protein GI | 108804700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.473892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTG GGAACGGAAC GATGACCGTG CAGGAGGCCA TCGATCGGAT CGGCTTCGGT
CGGTTTCAGA AGCGTCTGCT GGCCGTTTGT GGGGTGACGT GGGTAGCGGA CAGCGCAGAG
ATCCTGATGC TAGGATTCGC GCTCCCTTCC ATAATCGCCG AGTTCGCGAT CTCTCCAGCC
CAGGCTGGTC TGATCGCTAC CGCAACATTC GCTGGGATGC TGGTCGGCGC CTGGTTTTGG
GGAACCGTTT CAGATTACAT AGGTCGGCGC ACGGGCTTTC AGCTGACGGT ACTGACCTTC
GCAGTATTCG GACTGCTGTC CGCTTTCGCG CCGAGCTGGG AGTGGTTGGC GGTGCTTCGC
TTCATCACGG GCTTCGGCCT CGGCGGCGCG CTCCCGCTCG ATTTCTCGGT CTACGCCGAG
TTCTTGCCTA GCGAGAACCG GGGGCGCAAC CTAGTCATAC TCGAAAGTTT CTGGGCCGTC
GGTACGATCC TGGCTGCCGG GCTTGCGTGG CTCCTTGTAC CGAGCTTCGG CTGGCGCCCG
CTGCTCGCAG CGTCGGCGTT AGCGGCGCTA CTGGTGCTCT GGATCCGCAA GAGCATACCG
GAGTCGCCGC GCTTTCTAGC CATCTCTGGG AGGGCAGATG AGGCCAAAGA AATTCTCACC
GGCATAGCGG CGGAGAATGG TCGGCCCGCC CCCGAGCAGA CCCTGGTCGC TGGTGAAAGG
CAGGGTGGGG TCACCGTTAC GCGGCTCTGG GTGCCCGGGA TACGGCGCTC GACCCTGATG
TTATGGATCG CCTGGTTCTG CGTCGCCCTC GCCTACTACG GCATCTTCAC ATGGCTACCT
TCAACCTTCG CCGAGCAGGG CTTCTCGCCC CTCCGAACGT ACCAGAGTAC CTTCATCCTT
GCGCTGGCGC AGTTGCCAGG GTACTTTTCT GCCGCGTACC TGATCGAACG CATAGGCCGG
CGGAACACCC TTGGTCTCTA CCTCCTGGCG AGCGGCGTGT TCACCTTTCT ATTCGCTACC
GCATCAGGCT TCGGTTGGAT ACTCACCGCC TCCATCCTGA TGAGCTTCTT CTCTTTGGGG
GCCTGGGGGG CGCTCTACGC GTGGACGCCC GAGCTCTACC CGACCGAGAT CCGTGCTACC
GGCATGGGGT GGGCGAGCGG CATGTCTAGG ATCGCTGGCG TCTTCGCCCC GATCCTCGGG
GGTATATTGT TCGGTCTCGC GACGACGGCG GGCGGCTCCC TGCTATACGT CCTCTCCCTG
TGGTCCGCCT CCTTCATAGT GGGAGGGATC GTGGTCTTCC TGCTCGGCGT CGAGACGAAG
AGGCGAGCCT TGTCCGATAC CGTCTCCGAC TCTTCGGAGG AGGTCGCTAA AGAGGTGTAG
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| Protein sequence | MSAGNGTMTV QEAIDRIGFG RFQKRLLAVC GVTWVADSAE ILMLGFALPS IIAEFAISPA
QAGLIATATF AGMLVGAWFW GTVSDYIGRR TGFQLTVLTF AVFGLLSAFA PSWEWLAVLR
FITGFGLGGA LPLDFSVYAE FLPSENRGRN LVILESFWAV GTILAAGLAW LLVPSFGWRP
LLAASALAAL LVLWIRKSIP ESPRFLAISG RADEAKEILT GIAAENGRPA PEQTLVAGER
QGGVTVTRLW VPGIRRSTLM LWIAWFCVAL AYYGIFTWLP STFAEQGFSP LRTYQSTFIL
ALAQLPGYFS AAYLIERIGR RNTLGLYLLA SGVFTFLFAT ASGFGWILTA SILMSFFSLG
AWGALYAWTP ELYPTEIRAT GMGWASGMSR IAGVFAPILG GILFGLATTA GGSLLYVLSL
WSASFIVGGI VVFLLGVETK RRALSDTVSD SSEEVAKEV
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