Gene Rxyl_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1856 
Symbol 
ID4117412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1881884 
End bp1882603 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID638036648 
Producthypothetical protein 
Protein accessionYP_644622 
Protein GI108804685 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGC TAGAAGAAGC ACGCAAATTA CCAATGAGGG TGACGAGCAC ATATTCCGTG 
GCGGGACGAT GTGCATCTAC GGGGGCCTTG GGTGCCGTCG TGACGTCCAG TAGTCCGTCC 
GTCGGAGCTC GTTGTGCTCA GATCAAGGCC GGAGTGGGCG TAGTCCTCAC TCAGAACGTC 
ACTGACCCCA GGCTGGCGGA TATTGGGCTC TGTGCCCTGG AGCTAGGCTT CGATGCACCA 
GGCGCCGTGC GAGCGATGAG AGCTGTCTCT GTCTCCCACG AGTATCGGCA ACTTGCCGCG 
GTAGATGCTA GTGGGAGGTC GAGTGTGTAC ACGGGCGATA ACGCCCTCGG CGTGCATGCA 
GAGTTCCGAG CGGACAATGT CGCTAGCATC GGCAACTTGC TGAGCAATCC TGAAATCCCA 
GAGGCTATGG GACGCCACTT CGGTGAGCGG AGTGATCTCC CGCTCGCCGA GCGACTGCTC 
TCGTCCATAG AGCTTGGCTT CCGGATGGGA GGAGAATTAG ACCAAGAGCG CTCCATAGCC 
CTCATAGTCT ACACAGACAC ACCGTTTCCC TACGTGGATC TCCGCGTGGA TTACAGCGAC 
GATCCTCTGG GCGATCTCAA GCGGTTGTGG GAGGTCTACG GGCCGCAAGC GGAGAACTAC 
AAGACCCGGG CACTGGCACC CGAGCTGGCG CCCCCCTACG GCGTCAAAGG TGAAGAATAA
 
Protein sequence
MAMLEEARKL PMRVTSTYSV AGRCASTGAL GAVVTSSSPS VGARCAQIKA GVGVVLTQNV 
TDPRLADIGL CALELGFDAP GAVRAMRAVS VSHEYRQLAA VDASGRSSVY TGDNALGVHA 
EFRADNVASI GNLLSNPEIP EAMGRHFGER SDLPLAERLL SSIELGFRMG GELDQERSIA 
LIVYTDTPFP YVDLRVDYSD DPLGDLKRLW EVYGPQAENY KTRALAPELA PPYGVKGEE