| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1800 |
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| Symbol | |
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| ID | 4117244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1823820 |
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| End bp | 1826645 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036597 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_644571 |
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| Protein GI | 108804634 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.80302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCTGT TCGCTGTCCT GGCGCCGCTG GTCCTCGCCC TCCTCGCGGC CCCTGCCGCG
CTGCTCGCAG GGGCTTCGAA GCCCGCCCAT GCGGCGCCGG TGGGGACCGC GCTGGCCGCG
CTCGCCTTCG CGGCGACCCT CGCCGGCTGG CTCTCGGGGG GTGGCTCCGT GGACGTGGCC
TGGGTGCCGA GCTGGGACTT GCGCTTCGCG GTAAAGATGG ACGGGCTGGC AGCGCTCTAC
TCGCTGCTGG CCACCGGCAT CGGGCTCGTG GTGCTCGTCT ACTCGGCGGG CTACCTGCCG
CTGCACCTCG AGCACCAGGG ACGGCCCGCC TCTGAGGGAG TTGGCTTCTA CTTCTTCGTG
CTGCTCTTCA TGGGCTCTAT GGTCGGGCTC GCTATGGCCC AGGATCTCAT CCTCATCTTC
CTGTTCTGGG ACCTCACCGC CATAGCCTCC TACTACCTCA TCGGCTACGA CCGCCACAGG
GAGGAGTCGC GGGCCTCGGC CATGATGTCC CTCCTCATCA CCGGCATAAC GGCGGTGCTG
CTGCTCGTCG GGGCGCTCCT CCTCTACGCC TCCCACGGCA CCTTCTCCGT GCCCGAGCTT
GCCGGAAGGG TAGAGCCCGG GGCGCTGCTT GCGAGCGCCG GGCTCCTCGT CCTGCTCGCC
GCCTTCGCCA AGAGCGCCCA GGCGCCCTTC CACTTCTGGC TGCCGCGCGC CATGGCCGCC
CCGACGCCGG TCTCGGCCTA CCTGCACTCT GCGGCGATGG TGGCCGCGGG CGTCCTGCTC
ATCGGGCGCC TCTACCCGAT CCTCGCGCAG AGCGAGGCCC TGCTCGCCGT GATGTCCGCC
GTCGGGCTGC TCTCCATGGG GTTGGGCGGC GTCCTCGCGC TCACCCGCGA CACCCTCAAG
CAGCTTCTGG CCTACTCCAC CGTTGCGCAG TACGGCTACG TGGTCTTCAT GTACGGCCTT
GGGGGGCGCT ACGGCGCCGC GGGGGCCGCC TTCTACGTGA TCGCCCACGC GCTGGCCAAG
AGCGCGCTCT TTCTCAGCGC CGGGGCGGTG ACGGAGGCCA CTGGGGAGGA CAGGCTGTCC
CGCCTGGGGG GGCTGTGGAG CAAGATGCCG CTGCTTGCGG CATCTTCGGG CCTGGCGGCT
GCGGGGCTGG CCGCCCTGCC GCTCACGATC GGCTTCTTCA AGGACGAGTT CTTCTTCGCC
GCCACGCTCG AGCGGGGCGC GCTCTTCGGT GGGCTTGCGG TTCTGAGTGC GTCCGTTACG
CTTGCCTACA CCTGGAGGTT CTGGAGCGGC ATCTTTCTCG GTGAGCCGCT CCCCGGTGGC
GGTGTCCGCC GCGTGCCGGC GCTGCTCGTG GCGCCGGTCG TAGCGCTCGG GGGCGTCGCC
CTCGCAGGAG GGGTCTTCGC CATTCCTTTC GAGAGGCTGG CCGAGGCCGC CGGAGAGGCC
TCCTTCGGCT CCCCGACCCC GCTGGACGCC ACCTACCACG CCGAGGTGCT CCCGGAGTAC
GTCATGGCGC TCGCCACCTA CGCCCTCGGC GCGGCGATAG TGGTCTCGCG CCCGGCGTGG
GCGCGCGCCG CGCTGGGGTT TAGCCGTCTC GGGAAGGTCG TGGGCCCCGA GCGCGTCTAC
GGCCTGACCG TGCACGGGCT CAACCTCCTC TCCGACTACG TCCATCGGCT GGAGATCCGC
AACCTGAGGG GCCGCGTCGC TTTCGTGCTC CTGCCGACTG CCGCGCTGGT GGGCGCTGCC
GTGCTGATGA CCCCCGGAGC CGCCCCCTAC TGGGTGGGGC CGTTCTCGGC CGAGGACGCG
CCGCTGATGC TGGCGATGCT GACGGTGGCC GTGGTCTCCG TCGCCACGAC CCTCGCGCGG
CGGCACGTCA CGCTCGCGCT GGCGACCTCC AGCGCGGGCT TCGTGCTGGC GGTCATCTAC
GCGTTCTACG CGGCGCCGAA CGTGGTGCTG GTGGCCGTCC TGATCGAGAC CATGCTCACG
CTGCTGCTCG TCGCTACCCT GAGGCTCATC CCCTACGAGG CCCTGCACCG GCAGGCGATG
CTGCCGCCCG CGCGGCTGGC CCGCAAGGTC TTCGTGACGG CGGTCGCCGG CGCCCTGGCC
TTCGTCGTCG CCTGGGGGGC GCTCTCGCAG CCGCCGCCCG GGCAGACCAT CGCCGAGGAG
CACATCCGCC TCGCGCCGGA GGCGCACGCC GCCAACGTCG TTACGGCCAT CCTCGCGGAC
TTCAGGGCCC TGGATACTCT AGGCGAGATC ACCGTAGTGG CCCTGGTCCT GCTCGGTGTG
GCGACCCTGC TCGGGCAGGT GCCGAGGCCG CAGATGCATG CGGCGGGCGG CGGGCGTCCC
GCGGCGGCGC CGCAGCCGGC GGCGAGGGTG GTGACGCGGG CCATCGCGAG GCTGCTCTAC
CTGCCGGCGC TCCTCGTCGC CGCGGCCATC CTGGTCAAGG GCTTCGTCGA GACCGGCGAC
GGCTTCTCCG CCGGGGTGGT GGGCGCTCTG GGCGTGCTGC TGCGCTACCT GGCTTACGGG
CACGACGAGG CGAGGAAGCT CCTGCCCGTG CGTTACGCCA CGGCCATAGC CTTCGCGGGG
CTGCTCGTGG CCCTCTCGGT GGCTGCCGCG CCCCTGCTCT TCGGCGGGGC TCTCCTGACC
CACTACCCGC CGCCCGGCGC CGAGCCCCTC CACCTCGGGA CCCTGGAGGT GATGACCGCG
GTGCTCTTCG ACTTCGGGGT CTTCCTGCTG GTCTTTGGCT TCGCGGTAGG TGTGGTCTCG
TACTTCGCCC GGACCATCGC CGTGAGGGAG CGCTACGCGA CCGCGAGAGG GGGCAGGGAG
CGGTGA
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| Protein sequence | MALFAVLAPL VLALLAAPAA LLAGASKPAH AAPVGTALAA LAFAATLAGW LSGGGSVDVA
WVPSWDLRFA VKMDGLAALY SLLATGIGLV VLVYSAGYLP LHLEHQGRPA SEGVGFYFFV
LLFMGSMVGL AMAQDLILIF LFWDLTAIAS YYLIGYDRHR EESRASAMMS LLITGITAVL
LLVGALLLYA SHGTFSVPEL AGRVEPGALL ASAGLLVLLA AFAKSAQAPF HFWLPRAMAA
PTPVSAYLHS AAMVAAGVLL IGRLYPILAQ SEALLAVMSA VGLLSMGLGG VLALTRDTLK
QLLAYSTVAQ YGYVVFMYGL GGRYGAAGAA FYVIAHALAK SALFLSAGAV TEATGEDRLS
RLGGLWSKMP LLAASSGLAA AGLAALPLTI GFFKDEFFFA ATLERGALFG GLAVLSASVT
LAYTWRFWSG IFLGEPLPGG GVRRVPALLV APVVALGGVA LAGGVFAIPF ERLAEAAGEA
SFGSPTPLDA TYHAEVLPEY VMALATYALG AAIVVSRPAW ARAALGFSRL GKVVGPERVY
GLTVHGLNLL SDYVHRLEIR NLRGRVAFVL LPTAALVGAA VLMTPGAAPY WVGPFSAEDA
PLMLAMLTVA VVSVATTLAR RHVTLALATS SAGFVLAVIY AFYAAPNVVL VAVLIETMLT
LLLVATLRLI PYEALHRQAM LPPARLARKV FVTAVAGALA FVVAWGALSQ PPPGQTIAEE
HIRLAPEAHA ANVVTAILAD FRALDTLGEI TVVALVLLGV ATLLGQVPRP QMHAAGGGRP
AAAPQPAARV VTRAIARLLY LPALLVAAAI LVKGFVETGD GFSAGVVGAL GVLLRYLAYG
HDEARKLLPV RYATAIAFAG LLVALSVAAA PLLFGGALLT HYPPPGAEPL HLGTLEVMTA
VLFDFGVFLL VFGFAVGVVS YFARTIAVRE RYATARGGRE R
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