| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1743 |
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| Symbol | |
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| ID | 4116312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1772877 |
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| End bp | 1773680 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036541 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_644515 |
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| Protein GI | 108804578 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00781757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGCAGG CAGCACAGAC CCCGGCCGCC GTGCGGGCGC GCCCGGCGGG CTTCTGGAGG
GACCTCGCGA GCGTCGCCGG CCGGGCGCTG CGGGCGGTCC CGCGCGAGCC CGAGGTCCTC
ATCCCCTCGC TCATCGTGCC CCTCTTCTTC TTCGCGGTCA ACGTGGGGGC GCTCTCGGAC
ATCTCCTCCT TCGCCGGGAT AGAGGACTAC GAGGCCTTCC AGCTCCCCGT GGCCATAGTC
TTCGCCGTCA CCGGCGTCTC GCGGGCCTCC GCGCTCGTCA CCGACATCCA GAGCGGCTAC
TTCGACCGGC TGCTCGTCTC CCCCGTCAAC CGCTACAGCC TGCTGCTCGG GCTGATGGTC
GCGGACTTCG CGCTGGTCAT CGCGCTCTCC ATCCCCGTGC TCGCGCTGGG GCTCCTGCTC
GGAGTAGAGT TCGCGACCGG GCCGCTGGGG GCGCTGGCCT TCCTGCTTCT CGCCGGCCTG
TGGGGGCTCG CCTACACCGG GTTCCCGTAC GCCATCGCGC TGCGCACCGG CAACCCGGCG
GCGGTGAACT CCTCGTTCAT CCTCTTCTTC CCGTTCGCCT TCCTCACCAC CACCTTCCTC
CCCCAGGAGG CGCTCACCGG CTGGCTCGCC ACCGTCGCCG ACTACAACCC CGTCACCTAC
CTGCTGGCCG GGCTGCGGTC GCTGGTGAGC GAGGGCTGGG AGGCGGGCGA CCTGCTCCCG
GCGGCCGGTG CGGTGGCGGG CGTGGGGCTG CTCTCCTTCG CGCTGGCCTT CGCCGCCCTG
CGCGCCCGGG TGCGGCGCAG CTAG
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| Protein sequence | MQQAAQTPAA VRARPAGFWR DLASVAGRAL RAVPREPEVL IPSLIVPLFF FAVNVGALSD
ISSFAGIEDY EAFQLPVAIV FAVTGVSRAS ALVTDIQSGY FDRLLVSPVN RYSLLLGLMV
ADFALVIALS IPVLALGLLL GVEFATGPLG ALAFLLLAGL WGLAYTGFPY AIALRTGNPA
AVNSSFILFF PFAFLTTTFL PQEALTGWLA TVADYNPVTY LLAGLRSLVS EGWEAGDLLP
AAGAVAGVGL LSFALAFAAL RARVRRS
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