Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1722 |
Symbol | |
ID | 4116622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1750474 |
End bp | 1751373 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638036520 |
Product | xylose isomerase-like TIM barrel |
Protein accession | YP_644494 |
Protein GI | 108804557 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.688264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGGCA GCCTGCGCGT GGCGGGTGCT CCGATCTCCT GGGGGGTCAT CGAGATCCCC GACTGGGGTT ACCAGATGCC CGCAGACAGG CTGTTGCGGG AGGCAGCCTC CATCGGCCTG GAGGCGATGG AGGCGGGACC GGAGGGTTTC CTACCCGATG ATCCGGGGGA GGTCAGGGCT AAGCTCGAGG AGCATGGCTT GCGCCTTGTG GGCGGTTTCG TCCCGGTCGT GCTGCACGAG TTCGATGCTC GCCAGGAGGG TCTGGACCTC GTGGAACGCA GGGCGAAGTT CTTCTCCGCC GCCGGGGCGG ACACGCTTGT CCTTGCCGCC ATTCCGGTTG TAGGGGCCTT TGAGCAGACC GTAGATCTCG ACGAGGCGGG GTGGAGGGAG CTCTTCGAGA GCCTGAGGCG GGCGGAGGAG GTCTGCCGCC GCCACGGTCT TACGCTTGCC CTCCACCCTC ACTTCGGGAC CCTCGTGGAG ACCAGAGACC AGCTCTTACG CTTTCTCGAG GGCTCTGAGA CGGGGCTGTG TCTGGACACC GGACACCTCG TCATCGGGGG CAGCGACCCG GTGGAAGTCG CAGAGAGCGC GGCCGAGAGG GTTGTCCACG TCCACCTCAA GGACGTGGAC CTTGGGGTCG CCCGGAGGCT CGGTGCCCGG GAACTGGACT TCAGAGGTGC GTGCCGGGAG GAGGCCTTCC GTCCCCTCGG CGAGGGAGAC GTGGACGTGA GGCGGCTTCT GGAGGCGCTC GAAAGCGCCG GCTACTCTGG CTGGTACGTG CTCGAGCAGG ACATTCTGGT GGAGAAAGAG CCAGAGGAGG GTGAGGGGCC TGTCAACGAC GTGCGTAAGA GCTTAGAGTT CTTGAGGAGC GTTGTTGGCG GTGGAAAGGA GGAGCGGTGA
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Protein sequence | MNGSLRVAGA PISWGVIEIP DWGYQMPADR LLREAASIGL EAMEAGPEGF LPDDPGEVRA KLEEHGLRLV GGFVPVVLHE FDARQEGLDL VERRAKFFSA AGADTLVLAA IPVVGAFEQT VDLDEAGWRE LFESLRRAEE VCRRHGLTLA LHPHFGTLVE TRDQLLRFLE GSETGLCLDT GHLVIGGSDP VEVAESAAER VVHVHLKDVD LGVARRLGAR ELDFRGACRE EAFRPLGEGD VDVRRLLEAL ESAGYSGWYV LEQDILVEKE PEEGEGPVND VRKSLEFLRS VVGGGKEER
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