Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1664 |
Symbol | |
ID | 4117149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1685701 |
End bp | 1686504 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638036463 |
Product | peptidase C60, sortase A and B |
Protein accession | YP_644437 |
Protein GI | 108804500 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCGCGA TACGTTCCGC TGCGCGGAGG GGCGGGGCTC TGGCCCTGCT CCTCCTTTTC TGTCTGCTGC TCTGGGGCTG CGGGGGGGCG GCGCGGGGCC CCGGCGGGGG CCACGGCTCC GCCGAGAGTC CCTCTCCAAA ACCGGCGGAG GCCACCGCCG GGGAGGCGGC CCACTCCCCG GGCGGCCGGA GGGTCGAGGC GCTCCTCCCG GAGGAGGTGC TCTCCGAGGA AGAGCTCGAG CGGGAGGCGC CGGGCTACCG GGACTGGTAC AGGCCCGCCG GAGAGAAGGT GCGGCCCGTC TCCGGGGCCG GGGGCTCCTC CGCCGGGGCC ATACCCGCCG TCAGGCCGTT CAACTTCGGT CGCGACCCCG GAGGGCCAAA GGACAAGACC CTCTACCTCA CCGTGCCCAA GATAGGCCTC TCCCGGGTGC CGGTCTACAA CTCCACCTCC GAGGAGGATC TCAGGCGCTC CGCCGTGCAC GTCCCGGCGA CGGGCTTCCC TTGGCAGGAG GGGGCCAACG TCTTCATCGC GGGGCACCGG CTGGGGTACG CCGGGACCGG CTCCCACCTC GTCTTCTACG ACCTGCCCAG GCTCGAGCCG GGCGACGAGA TCATCCTCGA GGACGCAACC GGCGGGCGCT ACGTCTACCG GGTCTTCAGG GAGCTCACCG TCGGACCGGA GAACGTGGAG GTCATGAACC CCGTGGAGGG GAGGTCCGTC GTCTCCCTGC AGACCTGCAC CCTGCCGGAC TACTCCGAGA GGATCATCGT GCAGGGCGAG CTGGTGGGCG AGAAGCCCGC CTGA
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Protein sequence | MLAIRSAARR GGALALLLLF CLLLWGCGGA ARGPGGGHGS AESPSPKPAE ATAGEAAHSP GGRRVEALLP EEVLSEEELE REAPGYRDWY RPAGEKVRPV SGAGGSSAGA IPAVRPFNFG RDPGGPKDKT LYLTVPKIGL SRVPVYNSTS EEDLRRSAVH VPATGFPWQE GANVFIAGHR LGYAGTGSHL VFYDLPRLEP GDEIILEDAT GGRYVYRVFR ELTVGPENVE VMNPVEGRSV VSLQTCTLPD YSERIIVQGE LVGEKPA
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