Gene Rxyl_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1647 
Symbol 
ID4116256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1670705 
End bp1671178 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content71% 
IMG OID638036446 
ProductCMP/dCMP deaminase, zinc-binding protein 
Protein accessionYP_644420 
Protein GI108804483 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.318126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCT CTAGGGAGGC GGGCCGCCGC GCCCGGCCCT CGTGGGACGA GTACTTCATG 
CGCATCGCCC ACGAGGTCGC GACCCGCTCC ACCTGCCCGC GGCTCGCGGT GGGGGCCGTG 
GTCGTGCGCG ATAGGCGCAT CCTGACCACC GGGTACAACG GCAGCCCCTC CGGGATGCCG 
CACTGCGACG AGGTCGGCTG CCTCATCCGC GTCGTGGACG GGCGCGAGAG CTGCCAGAGG 
ACGCTCCACG CCGAGCAGAA CGCCCTCATA CAGGCCGCCT ATCACGGCGT CTCGGTGCGC 
GACGCGGCCA TGTACTGCAC CCACCAGCCG TGCCTGCTGT GCGTCAAGAT GATCATGAAC 
TCCGGCATAA GGGAGGTCTA CTACGCGGGG GGCTACCCCG ACCCGCTCGC CACCGAGCTC 
GCCGCCGAGG GGGGTCTGCG GATGGTCCGC CTGGAGTGGC CGCCCCGGGA ATGA
 
Protein sequence
MEPSREAGRR ARPSWDEYFM RIAHEVATRS TCPRLAVGAV VVRDRRILTT GYNGSPSGMP 
HCDEVGCLIR VVDGRESCQR TLHAEQNALI QAAYHGVSVR DAAMYCTHQP CLLCVKMIMN 
SGIREVYYAG GYPDPLATEL AAEGGLRMVR LEWPPRE