| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1619 |
|---|
| Symbol | |
|---|
| ID | 4116365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1643340 |
|---|
| End bp | 1644779 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638036418 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_644392 |
|---|
| Protein GI | 108804455 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000199695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTCG AGCGGGTGTA CGACGGGGAT CTGGCGCAGG CGAGCTACTT TATCGGGTGT
CAGGCGACCG GGGAGGCCGT GGTGGTGGAC CCGCGGCGGG ACATCGGGGC GTACCTGGAG
ATGGCCCGCA AGAACGGCAT GCGCATCGCT GCGGTGACCG AGACGCACAT CCACGCCGAC
TACCTCTCCG GTTCCAGGGA GCTGGCGGCG GCTACCGGGG CGACGCTCTA CCTCTCCGAC
GAGGGGGACG AGCCCTGGAA GTACGGCTTC GAGGGCGAGA GGCTGCACGA CGGCGACGAG
ATAAGGGTCG GCAACGTCGT GCTGAAGGCG CTGCACACGC CGGGGCACAC CCCCGAGCAC
CTCTCGTTCC TCGTCACCGA CGGGGCTGCA GCGGAGGAGC CGGGCTACAT CCTCACCGGA
GACTTCGTGT TCGTGGGGGA TCTCGGGCGC CCCGACCTGC TGGAGGAGGC CGCGGGCATG
GCCGGCACGC GCGAGGAGGG TGCGCGGCGG ATGTTCCGGA GCCTCCGGGA GAGGTTCCTC
TCCCTCCCGG ACTACGTGCA GGTCTTCCCC GGGCACGGCT CGGGGAGCGC CTGCGGCCGG
GCGCTCGGGG CGGTGCCGAG CACGACGGTC GGTTACGAGA GGCGCTTCTC CTGGTGGAGT
AGGTATGTGG AGAGCGGGGA CGAGGAGGGC TTTGTGGAGG CCCTGCTCGA GGGCCAGCCC
GACGCGCCGG CCTACTTCGG CCGGATGAAG CGCCAGAACA GGGAGGGACC GGCGCTGCTC
GGCGAGCTGC CGGAGCTCAG GCGCTACGGG AGCGAGGAGC TCGCGCGCCT GCTGCAAGGG
GGCGAGGTGC TGCTCGTGGA CACCCGCAGC CTCGAGGAGT ACTACCGGAG GGCGATACCC
GGCGCCGTCG TCATACCCGG CGGCGAGCAC CTCGCCACCT CGGCGGCGTG GGTCGTAGAC
CCCGAGGAGG ACGGGGACAT AGTCCTCCTC GCGCGCGGCG AGGAGGACGC GCAGCGGATG
CGGAACCACC TCATACGGGT CGGGATAGAC AGGGTGCGGG GCTACATCAC CGCCACCGAA
GGGCTGCCCG GGGAGCCGGT GGTGCTCGTG CCGCCCGAGG AGCTCTCGGG GGGCAACGGC
ACCTTCGTGC TCGACGTGCG GGCGAGGAGC GAGTACCGGG CGGGGCACAT CCCGGGGGCC
GTCCAGCTGC ACGTCGGGCG CCTGCGCTGG CGCCTCGAGG AGCTGCCGGA GGGCCGCCCG
GTGGTCGTCC ACTGCCAGAG CGGGCGGCGG GCGGCCATCG CGGCCAGCAC GCTGCGGCGG
GAGGGCTTCG GGGAGGTCTA CGAGCTCGAA GGCAGCTACG AGGGGTGGGC GAGGGCCCGC
GGGAGAGGGG GCGCTACTGC CTCGCCGCCT GCGCCCGGCG CTTCAGGTAG GCGTAGATAA
|
|---|
| Protein sequence | MLFERVYDGD LAQASYFIGC QATGEAVVVD PRRDIGAYLE MARKNGMRIA AVTETHIHAD
YLSGSRELAA ATGATLYLSD EGDEPWKYGF EGERLHDGDE IRVGNVVLKA LHTPGHTPEH
LSFLVTDGAA AEEPGYILTG DFVFVGDLGR PDLLEEAAGM AGTREEGARR MFRSLRERFL
SLPDYVQVFP GHGSGSACGR ALGAVPSTTV GYERRFSWWS RYVESGDEEG FVEALLEGQP
DAPAYFGRMK RQNREGPALL GELPELRRYG SEELARLLQG GEVLLVDTRS LEEYYRRAIP
GAVVIPGGEH LATSAAWVVD PEEDGDIVLL ARGEEDAQRM RNHLIRVGID RVRGYITATE
GLPGEPVVLV PPEELSGGNG TFVLDVRARS EYRAGHIPGA VQLHVGRLRW RLEELPEGRP
VVVHCQSGRR AAIAASTLRR EGFGEVYELE GSYEGWARAR GRGGATASPP APGASGRRR
|
|---|
| |