| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1581 |
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| Symbol | |
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| ID | 4116463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1605680 |
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| End bp | 1606414 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036378 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_644355 |
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| Protein GI | 108804418 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0759386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGCACG AACCCGCGCA GGAGCGGCGA GGGATCCTCG TCCCGCAGGA GGACGAGCTG
GAGCAGCCGC CCTACCTCTA CCCCGACTAC GTCGGGACGC GCCTGAGGGC GCCCAAAGAA
CCCCTGATCA TCCTGCCCAA GACCCTCTCG GACATCACGG GCCCAATCTA CGGGCACCAC
AGGCCGGGCG AGCTCGACAA CGACCTCACC CGCCAGCACG AGGGCGAGCC GCAGGGGCAG
AAGATCATCG TGCACGGCAG GGTCCTGGAC GGCGACGGGC GCCCGGTCAG GAACACCCTC
GTCGAGATCT GGCAGGCCAA CGCTGCCGGG CGCTACCGGC ACAAGGTCGA CCAGCACCCC
GCCCCCATAG ACCCCAACTT CAGCGGGGCG GGCAGGACGC TCACCGACGA TGACGGCTAC
TACCGCTTCG TCACCATAAA GCCCGGGGCC TACCCCTGGC AGAACCACTA CAACGCCTGG
CGCCCGGCGC ACATCCACTT CTCCCTCTTC GGGAGGGCGT TCAGGAGCCG GCTGGTGACC
CAGATGTACT TCCCCGGCGA CCCGCTCTTC TTCCAGGACC CCATCTTCCA GTCGGTGCGC
GACGAGAAGG CCCGCCGGCG CATGATCTCC TCGTTCGACC TGGAGGCCAC CATCCCGGAG
GAGGCCCTGG GCTTCCGCTT CGATATCGTG CTCGAGGGCC GGGACGCTAC CCCCTTCGAG
AGGCCGCACG CGTGA
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| Protein sequence | MQHEPAQERR GILVPQEDEL EQPPYLYPDY VGTRLRAPKE PLIILPKTLS DITGPIYGHH
RPGELDNDLT RQHEGEPQGQ KIIVHGRVLD GDGRPVRNTL VEIWQANAAG RYRHKVDQHP
APIDPNFSGA GRTLTDDDGY YRFVTIKPGA YPWQNHYNAW RPAHIHFSLF GRAFRSRLVT
QMYFPGDPLF FQDPIFQSVR DEKARRRMIS SFDLEATIPE EALGFRFDIV LEGRDATPFE
RPHA
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