| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1537 |
|---|
| Symbol | |
|---|
| ID | 4116401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1554007 |
|---|
| End bp | 1554609 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638036332 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit ClpP |
|---|
| Protein accession | YP_644311 |
|---|
| Protein GI | 108804374 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.17923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACT ACGATCCGCA GGGCGTAATA CCCTACGTCA TAGAGCAGAG CCCGCGGGGC
GAGCGGGCCA TGGACATCTA CTCCCGGCTG CTGAAGGACA GGATCATCTT CCTCGGCACG
CCGGTGGACG ACCAGGTCGC CAACGCGATC ATGGCGCAGC TGCTGCACCT GGAGAGCGAG
GACCCCGAGC AGGACATCAA CCTGTACATC AACTCGCCGG GGGGCAGCGT CTCCGCCGGG
CTCGCCATCT ACGACACCAT GCAGTTCGTC AAGCCCGACA TCGTGACGAC GGCGCTCGGG
ATGGCGGCCT CCATGGGGGC GTTTCTGCTG GCGGCCGGGA CCAAGGGCAA GCGGTTCGCG
CTGCCCAACA CCCGGATACT TCTGCACCAG CCGGCGGTGG GCGGTCTCGC CGGGCAGGCC
TCCGACGTGG AGATCCACGC CAGGGAGCTC ATCCGGACCA AGCGGCGCCT CAACGAGATC
CTCTCCGAGC ACACCGGCCA GCCCTACGAC AAGATAGAGC GCGACACCGA CCGCGACTTC
ATCATGGGCG CCGAGGAGGC CATAGAGTAC GGTCTCATCG ATGACATCGT GAGGCACCAC
TAG
|
|---|
| Protein sequence | MSYYDPQGVI PYVIEQSPRG ERAMDIYSRL LKDRIIFLGT PVDDQVANAI MAQLLHLESE
DPEQDINLYI NSPGGSVSAG LAIYDTMQFV KPDIVTTALG MAASMGAFLL AAGTKGKRFA
LPNTRILLHQ PAVGGLAGQA SDVEIHAREL IRTKRRLNEI LSEHTGQPYD KIERDTDRDF
IMGAEEAIEY GLIDDIVRHH
|
|---|
| |