| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1445 |
|---|
| Symbol | |
|---|
| ID | 4117243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1466801 |
|---|
| End bp | 1467934 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638036237 |
|---|
| Product | L-alanine dehydrogenase |
|---|
| Protein accession | YP_644219 |
|---|
| Protein GI | 108804282 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0104165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGATCG GGGTCGTAAG GGAGGTCGCC GCCGGCGAGA GCCGGGTGGC GCTCGCCCCG
CCGGCGGTGC ACGAGCTGTG CCGGGCCGGG CACCGGGTCC TCGTCGAGTC CGGCGCGGGG
GTGGCCTCCG GGATCTCCGA CGCCGACTAC GCGGCCGCCG GGGCCCGGGT GCTGGAGGAG
GCCGGGCGGG TCTACCGGGA GGCCGAGCTT CTGGTAAAGG TCCAGGGGCC CGTCCCCGAG
GAGCACCCCC GCCTGAGGGA GGATCTCATC CTCATGGCCT TCCTCTCGCT TCCCGTCAAC
CCCGCCCTCA TGGAGGCCCT CCTCGCCTCC CGCTGCGTGG CCTTCGCGAT GGAGGCGATC
CGGGACGGGC GCGGCAGGCT GCCCGTGCTC ACCCCGATGA GCGAGATCGC GGGCCGCCTC
GTCCCCCAGA TCGGGGCCCA CTACCTGCAG CGCCAGTCCG GGGGCCGGGG CATCCTGCTG
GGCGGGGCGA CCGGCGTGCT GCCGGGGCGG GTGGTGATCT TGGGCAGCGG CATCGTGGGG
ACGGCCGCCG CCCGGGTGGC CAGCGGGCTC GGGGCCGAGA CGGTGGTGGT GGACCGCGAC
CTGGACCGGC TGCGCGCGCT CGAGGCCCTG CGGCTGCGCG GGGTGAGCAC GCTCGCCTCC
AGCCGCCTCG CCATCCAGGA GGCGGCGGCC GGGGCCGACC TGCTGATCGG GGCGGTGCTC
GTGGTCAGCT CCCGCACCCC CGCGCTCGTG GACGCCGAAA CGGTCGGGCT GATGCGGGAG
GGGAGCGTGA TCGTGGACGT GGATGTGGAC TACGGCGGGT GCATCGAGAC CTCGCGCCCC
ACGACGCTCG AAGACCCCAC CTTCGTGGAG CGCGGCGTGA TCCACTACTG CGTGAGGAAC
GTCCCCGCCG CGGTCCCGGT CACCTCCACC CAGGCGCTCT CCAACGCCCT GCTGCCCCAC
GTCCGGCGGA TAGCCGCCCT GGGGCTCACC GACGCCCTCA ACGCCGACGA GGGGCTCAGG
CAGGGGGTGG CCGTGGCCGA GGGGCGCGTC GTGGACCCGG TGCTCGCCCG CAGCACGGGC
ACGGAGTACC ACCCCATCTC CTCGGTGCTA CCGCTGCACC TGGAGGCGAG ATGA
|
|---|
| Protein sequence | MRIGVVREVA AGESRVALAP PAVHELCRAG HRVLVESGAG VASGISDADY AAAGARVLEE
AGRVYREAEL LVKVQGPVPE EHPRLREDLI LMAFLSLPVN PALMEALLAS RCVAFAMEAI
RDGRGRLPVL TPMSEIAGRL VPQIGAHYLQ RQSGGRGILL GGATGVLPGR VVILGSGIVG
TAAARVASGL GAETVVVDRD LDRLRALEAL RLRGVSTLAS SRLAIQEAAA GADLLIGAVL
VVSSRTPALV DAETVGLMRE GSVIVDVDVD YGGCIETSRP TTLEDPTFVE RGVIHYCVRN
VPAAVPVTST QALSNALLPH VRRIAALGLT DALNADEGLR QGVAVAEGRV VDPVLARSTG
TEYHPISSVL PLHLEAR
|
|---|
| |