| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1338 |
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| Symbol | |
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| ID | 4116025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1364590 |
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| End bp | 1366818 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638036132 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_644114 |
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| Protein GI | 108804177 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGACCG CAAGGGCACA GGGACGGGTC AGGGGCGCGG CTGGGCCGCC GGTCACCATC
TCCGCGCTTT TGGAGAAGGT GCTCGGGTAC TGGCCCGACC AGAGCGCCGA GGAGCTGATC
GCCGAGGCCT ACAACCTGGC GCACGCCGCC CACCGGGGGC AGCGGCGCCG GAGCGGGGAG
CCCTTTATCC TGCACCCGCT GGCCACCGCG GACATCCTCG CCGACCTCCG GATGGACCCC
ACCACCATCG CGGCGGCGCT GCTGCACGAC GTGCTGGAGG ACACCGGGGT CACCAAGGAG
GAGCTCGCCG GGAGGTTCGG CGCGGAGGTG GCCGAGATCG TGGACGGGGT CACCAAGCTC
AAGAGGCTGC CCAGCGGGAA TCTGGAGGAG GCGCAGGCCG AGTCGCTGCG GAAGATGATC
GTGGCCATGA GCCGGGACGT GCGCGTGATC ATCATCAAGC TGGCCGACCG GCTGCACAAC
ATGCGCACCC TTGAGTACCT CAAGCGGGAG ACCCAGCTCG AGAAGGCCAC CGAGACGCTC
GAGATCTACG CCCCGCTGGC GCACCGCCTC GGGATCTACT CGCTCAAGTG GGAGCTCGAG
GATCTGGCCT TCGCCACCCT CCACCCGCGG CGCTACGAGG AGATAAAGCG GCTGGTGGCC
GCCCGGCGGG ACGAGCGGGA GGCGTTCATC AGCGCCCGGG CCGCCGAGCT CAAGCGCTAC
CTCTCCGAGG CAGGCATCGA GGCCGAGGTC AGGGGCCGGG TCAAGCACTT CTACTCCATC
TACAACAAGA TGGTCCGCCG CAACAAGGAG TTCAACGAGA TCTACGACCT GGCGGGCCTG
AGGGTGATCG TGGGCTCCGT GCGCGACTGC TACGGGGCGC TGGGGGTCAT CCACTCCGTC
TGGAAGCCGA TCCCCGGGCG CTTCAAGGAC TACATCGCGA TGCCCAAGTT CAACATGTAC
CAGTCGCTGC ACACCACGGT GATGTCCAAC GAGGGCAAGC TGCTGGAGAT ACAGATCCGC
ACCGAGGAGA TGGACCGCAC CGCCGAGTAC GGCATCGCCG CGCACTGGAT GTACAAGGAG
GGGGTCGGCG AGAACGGGCG GGCGGACCGG CTGGCCTGGC TGAAGAGCAT GATGGAGTGG
CAGCAGGAGA CCTCCAGCGC CCTGGAGTTC ATGGAGGCGC TCAAGGGCGA GCTCGGCGCC
GACGAGGTCT ACGTCTTCAC CCCCAAGGGG GACGTGATAA GCCTCCCCTC CGGGGCCACC
CCGATAGACT TCGCCTACCA CGTGCACACC GAGGTCGGCC ACCGCTGCAT CGGGGCGAAG
GTGAACGGCA GGATCGTCCC GCTGGACTCG GAGCTGGTCT CCGGGGACCG GGTGGAGATC
ATCACCGGCA AGTCGGCGAG CCCCTCCCGC GACTGGCTCT CGGTGGTCAA GAGCGGCCGG
GCGCGCAACA AGATCCGGCA GTACTTCAAC AAGGCGGACC GGGAGGAGAA CCTCGCCTCC
GGGCGGGAGA AGGTGATGGA GCTGCTCAAG AAGCGGCGCC TGAACAACGT GCCGCACGAG
GTGCTGGAGG AGGTGGCCGC GGACTCCAAC TACCAGAGCC TCGACGACCT CTTCGCCGCC
GTGGGGCAGG GCGCCCTCTC GGCGGAGAAC GTGGTGCACC GGGTGGCCGA GAGGGTGGAG
CCCCCGGAGG AGGAGAGCGC GCCCCGCAGC CCGGCGCTCG CCCCGCTGCC GCTCCCCGAC
GAGGGGCGGC CGGACGAGGA GACGGGGGTG CGGGTGATCG GGGCGAGCGG CATCCTGACC
CGGCTGGCGC GCTGCTGCAC CCCGATGCCC GGCGACGAGA TCGTGGGCTA CGTCTCGCTG
GGGCGTGGGG TGGTGGTGCA CGCCGCCGGC TGCCCCAACG CCCGCGCGCT GCGGGAGCGC
GACCCGGACC GCTTCGTGGA GGTGGAGTGG GCCGTGGGGG ACGGGAAGCT CTTCACCGTG
GAGCTGATGG TCGAGGCCCT CGACAGGATG CACCTTCTGC GCGACATCAC CGCGACCATC
TCCGACTCGG GGGTGAGCAT CCTCTCCGCC CGGGTGGACA CCATCGAGGA GCGCACCGCC
CTCAGCCGCT TCGCCTTCCG GGCGGCGAGC GCCCAGCACG TGGACGAGAT CATCCGGAAG
GTGCGCGCGA TCCCGGACGT CTACGACGTC TACCGGGTCT CGCGCGACGG CACGCCGATC
GAGAGGTAG
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| Protein sequence | METARAQGRV RGAAGPPVTI SALLEKVLGY WPDQSAEELI AEAYNLAHAA HRGQRRRSGE
PFILHPLATA DILADLRMDP TTIAAALLHD VLEDTGVTKE ELAGRFGAEV AEIVDGVTKL
KRLPSGNLEE AQAESLRKMI VAMSRDVRVI IIKLADRLHN MRTLEYLKRE TQLEKATETL
EIYAPLAHRL GIYSLKWELE DLAFATLHPR RYEEIKRLVA ARRDEREAFI SARAAELKRY
LSEAGIEAEV RGRVKHFYSI YNKMVRRNKE FNEIYDLAGL RVIVGSVRDC YGALGVIHSV
WKPIPGRFKD YIAMPKFNMY QSLHTTVMSN EGKLLEIQIR TEEMDRTAEY GIAAHWMYKE
GVGENGRADR LAWLKSMMEW QQETSSALEF MEALKGELGA DEVYVFTPKG DVISLPSGAT
PIDFAYHVHT EVGHRCIGAK VNGRIVPLDS ELVSGDRVEI ITGKSASPSR DWLSVVKSGR
ARNKIRQYFN KADREENLAS GREKVMELLK KRRLNNVPHE VLEEVAADSN YQSLDDLFAA
VGQGALSAEN VVHRVAERVE PPEEESAPRS PALAPLPLPD EGRPDEETGV RVIGASGILT
RLARCCTPMP GDEIVGYVSL GRGVVVHAAG CPNARALRER DPDRFVEVEW AVGDGKLFTV
ELMVEALDRM HLLRDITATI SDSGVSILSA RVDTIEERTA LSRFAFRAAS AQHVDEIIRK
VRAIPDVYDV YRVSRDGTPI ER
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