| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1316 |
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| Symbol | |
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| ID | 4115983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1345870 |
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| End bp | 1346766 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036110 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_644092 |
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| Protein GI | 108804155 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.110262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAGA ACGGACACAT AACCGGAACC TTCAGGGTCA AGAGCGGGAT GGCCCAGATG
CTCAAGGGCG GGGTCATCAT GGACGTGGTC AACGCCGAGC AGGCCAAGAT AGCCGAGGAG
GCGGGGGCGG TTGCGGTGAT GGCCCTGGAG AGGGTGCCCG CGGACATAAG GGCGCAGGGC
GGGGTGGCGA GGATGAGCGA CCCCGAGAAG ATCATCGAGA TCCAGCAGGC CGTGACCATC
CCCGTGATGG CCAAGGTGCG CATCGGGCAC TTCGTGGAGG CCCAGATCCT CGAGGCGCTC
GAGGTGGACT ACATAGACGA GTCGGAGGTT CTCACCCCCG CCGACGAGAG AAACCACATA
AACAAGTGGG ACTTCAAGGT GCCTTTTGTG TGCGGGGCCA CCAATTTGGG GGAGGCGCTC
AGGCGCATCG GGGAGGGTGC GGCCATGATC CGCTCCAAGG GCGAGGCCGG GACCGGCAAC
GTGGTGGAGG CCGTCAGGCA CATGCGGGAG ATCGTCGGGG GGATAAGGAG GCTCGGCGCG
CTCGGTCCCG AGGAGCTCAT GTCCGAGGCC AAGGCGCTTG GAGCCCCCTA CGAGCTGGTG
AAGTGGGTGG CCGAGAACGG CAGGCTGCCG GTGGTCTTGT TCACGGCGGG CGGGATAGCC
ACCCCGGCGG ACGCGGCGCT GATGATGCAG CTTGGGGCCG ACGGGGTGTT CGTGGGCAGC
GGGATCTTCA AGAGCGAGGA CCCGGCGCGG CGGGCTCAGG CGATAGTGAA GGCCACCACC
CACTACGGGG ACGCGAAGCT GCTCGCCGAG GTGAGCCGGG GCCTCGGGGC GGCGATGGCG
GGCCGCGAGA TGGGCGAGCT TTCGGAAGGG GAGCGGCTGG CTGCGCGTGG CTGGTAG
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| Protein sequence | MAENGHITGT FRVKSGMAQM LKGGVIMDVV NAEQAKIAEE AGAVAVMALE RVPADIRAQG
GVARMSDPEK IIEIQQAVTI PVMAKVRIGH FVEAQILEAL EVDYIDESEV LTPADERNHI
NKWDFKVPFV CGATNLGEAL RRIGEGAAMI RSKGEAGTGN VVEAVRHMRE IVGGIRRLGA
LGPEELMSEA KALGAPYELV KWVAENGRLP VVLFTAGGIA TPADAALMMQ LGADGVFVGS
GIFKSEDPAR RAQAIVKATT HYGDAKLLAE VSRGLGAAMA GREMGELSEG ERLAARGW
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