Gene Rxyl_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1304 
Symbol 
ID4116967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1327804 
End bp1328475 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content75% 
IMG OID638036095 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_644080 
Protein GI108804143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.357101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTCGC CCCGCCGGGC GAGGCGGCTG CAGCGCAAGC GCTACCGGGA GGAGGAGCGC 
CTGTTTCTGG CCGAGGGGGA GCGCCTCCTC GCCGAGGCCA CCGTGCCGCC GCTGCGGGTG
TTCACCGAGC CCGAACAGAT CCGTCGCGTC TCCACGCTGA AGACCCCGGC CGGCCCGGTC
GGGGTCTTCC CGTACCTGGA CGTCTCCCCG GAGGAGCTGC TCGCCAGGGG CCGCATCGTG
GTTCTGCTCG AGGGGGTGCA GGACCCGGGC AACGTGGGGA CCGTGATCCG CTCCGCCCAC
GCCTTCGGGG CGGGGGTGGC CCTCTCGCGG GGCTGCGCCG ACCTCTACAA CCCCAAGACG
GTCCGCTCCA CGATGGGCTC GCTCTTCCGC GTGCCGGTGG CCAGGGAGCT CGATCCCCTG
GCCTTTCTCG AGCTCGCGCG CGGGGCGGGC TTCGGGCTCG CCGCCGCAAC CCCCGGCGGC
GGCGAGCCCC CCGGGAGCAT GCCCGGCGGG AACCTCGTGG TGGCGGTCGG CTCCGAGGGG
GCCGGGCTCT CCCCGGGGGT CGTCCGCGCC TGCGGGGTGC GGGTCAGCAT CCCCTCCCGC
GCGCCCTCGC TCAACGCCGC CGTCGCGGCC TCCATCCTGC TCTACGAGGC ATACCGCCGT
GTGCTAACAT AA
 
Protein sequence
MISPRRARRL QRKRYREEER LFLAEGERLL AEATVPPLRV FTEPEQIRRV STLKTPAGPV 
GVFPYLDVSP EELLARGRIV VLLEGVQDPG NVGTVIRSAH AFGAGVALSR GCADLYNPKT
VRSTMGSLFR VPVARELDPL AFLELARGAG FGLAAATPGG GEPPGSMPGG NLVVAVGSEG
AGLSPGVVRA CGVRVSIPSR APSLNAAVAA SILLYEAYRR VLT