Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1304 |
Symbol | |
ID | 4116967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1327804 |
End bp | 1328475 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638036095 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_644080 |
Protein GI | 108804143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.357101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCTCGC CCCGCCGGGC GAGGCGGCTG CAGCGCAAGC GCTACCGGGA GGAGGAGCGC CTGTTTCTGG CCGAGGGGGA GCGCCTCCTC GCCGAGGCCA CCGTGCCGCC GCTGCGGGTG TTCACCGAGC CCGAACAGAT CCGTCGCGTC TCCACGCTGA AGACCCCGGC CGGCCCGGTC GGGGTCTTCC CGTACCTGGA CGTCTCCCCG GAGGAGCTGC TCGCCAGGGG CCGCATCGTG GTTCTGCTCG AGGGGGTGCA GGACCCGGGC AACGTGGGGA CCGTGATCCG CTCCGCCCAC GCCTTCGGGG CGGGGGTGGC CCTCTCGCGG GGCTGCGCCG ACCTCTACAA CCCCAAGACG GTCCGCTCCA CGATGGGCTC GCTCTTCCGC GTGCCGGTGG CCAGGGAGCT CGATCCCCTG GCCTTTCTCG AGCTCGCGCG CGGGGCGGGC TTCGGGCTCG CCGCCGCAAC CCCCGGCGGC GGCGAGCCCC CCGGGAGCAT GCCCGGCGGG AACCTCGTGG TGGCGGTCGG CTCCGAGGGG GCCGGGCTCT CCCCGGGGGT CGTCCGCGCC TGCGGGGTGC GGGTCAGCAT CCCCTCCCGC GCGCCCTCGC TCAACGCCGC CGTCGCGGCC TCCATCCTGC TCTACGAGGC ATACCGCCGT GTGCTAACAT AA
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Protein sequence | MISPRRARRL QRKRYREEER LFLAEGERLL AEATVPPLRV FTEPEQIRRV STLKTPAGPV GVFPYLDVSP EELLARGRIV VLLEGVQDPG NVGTVIRSAH AFGAGVALSR GCADLYNPKT VRSTMGSLFR VPVARELDPL AFLELARGAG FGLAAATPGG GEPPGSMPGG NLVVAVGSEG AGLSPGVVRA CGVRVSIPSR APSLNAAVAA SILLYEAYRR VLT
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