| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1298 |
|---|
| Symbol | |
|---|
| ID | 4116961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1322460 |
|---|
| End bp | 1323584 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638036086 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_644074 |
|---|
| Protein GI | 108804137 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGTAG CGTTCTTCAC CGAGACGTTC CTCCCGGCCA CCGACGGCGT GGTGACCCGG
CTGCGCTACA CGCTGCGGGA GCTCGCCCGC CTCGGGGACG AGGCCCTCGT GATCGCCCCC
CGCTACCCGG AGGGCGGCCC CGCCGCCTTC GCCGGCCACC GAATCTTCCG GGTCCCGGGC
GTCCCCTTCC CGCCCTACCC CCAGATACGG CTGGCCCCCG CCAACCCCGG CGTGGGGCGC
GAGCTGCGGC GCTTCGGGCC GGACCTGATC CACGCGGTCA ACCCCTACAT CCTCGGGATG
GCCGCCCCCT TCTACGCGCG GCGGCTGAAG GTTCCGCTCG TGGCCTCCTA CCACACCAAC
GTGGCCGCCT ACGCCCGCTT CTACCGGCTC GGCTTTCTGC ACCGGGCCGC CCGGCTGTAC
ACCCGCGCGG TGCACAACCG GGCCGCCGTG AACCTCTGCA CCTCCTCTGC GACGCTGGAG
TACCTCCGCG GGGAGGGGAT ACGCGCCCTC CGCCTCTGGC CCCAGGGGGT GGACTGCGAG
CTCTTCGGGC CGCACAGGGC CTCCGGGCGC TGGCGGGAGA GGCTCTCCGG CGGCCACCCG
GACGCCGGGC TGCTCCTCTT CGTCGGGCGG CTCGCCCCGG AGAAGGGCAT AGAGCAGCTG
CGGGCGGCGC TGGACAAGAT GCCCGGCGTC CGGCTCGCCC TCGTGGGCGA CGGGCCCGCC
CGGCCGGCCC TGCAGAGGGT GTTCGCCGGG ACGCCCACGG TCTTCACCGG CGTGCTGCAC
GGCGAGGAGC TCGCCGCCGC CTACGCCTCA GCGGACCTCT TCGTCTTTCC TTCCACCACC
GAGACCCTGG GGATGGCGAT GCTCGAGGCG CTCGCCTCCG GCGTCCCGGT CATCGCGGCC
CGCAGCGGCG CCTCGCGGGA GGTGGTGGAC GATGGCGAGA CCGGCCTCCT GTACGAGCCT
GGCTCCGTGT CCTCGCTGGC CGCCGCGGCC CACCGGCTGC TGGCCGACGA ACCGCGGCGG
GCCTCCATGG CCCGCAGGGC CCGCGCCGCC GCCGAGCGGC GCAGCTGGGA GGCCGCGACC
CGGACGCTGC GCGGCTGCTA CCTGGAGGCG CTGGGCTCCC GATGA
|
|---|
| Protein sequence | MRVAFFTETF LPATDGVVTR LRYTLRELAR LGDEALVIAP RYPEGGPAAF AGHRIFRVPG
VPFPPYPQIR LAPANPGVGR ELRRFGPDLI HAVNPYILGM AAPFYARRLK VPLVASYHTN
VAAYARFYRL GFLHRAARLY TRAVHNRAAV NLCTSSATLE YLRGEGIRAL RLWPQGVDCE
LFGPHRASGR WRERLSGGHP DAGLLLFVGR LAPEKGIEQL RAALDKMPGV RLALVGDGPA
RPALQRVFAG TPTVFTGVLH GEELAAAYAS ADLFVFPSTT ETLGMAMLEA LASGVPVIAA
RSGASREVVD DGETGLLYEP GSVSSLAAAA HRLLADEPRR ASMARRARAA AERRSWEAAT
RTLRGCYLEA LGSR
|
|---|
| |