Gene Rxyl_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1273 
Symbol 
ID4115999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1296890 
End bp1297564 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content74% 
IMG OID638036061 
ProductTrkA-N 
Protein accessionYP_644049 
Protein GI108804112 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.600058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGC AGTTCGCGGT CATCGGGCTC GGAAGGGTGG GCGCCTCCAT GGTGGAGACC 
CTGCTCTCCC TGGACCACGA CGTGCTCGGC ATCGACAGGG ACCGCGACCT GGTGCAGGAG 
CTCTCCGGGG AGCTGCCGCG GGCCGAGCTG GTGGTCGCCG ACGCCACCGA GGCCCCGACC 
CTGCGCGACC TGAACCTGGA GCAGTTCGAC GGGGCGGCGG TGACCATCGG GGAGGACCTG 
GAGGCCAGCA TCCTCTCCGC CGCGGTCCTC AAGGAGATAG GGGTCCCGTT CGTGGTCGCC 
CGGGCCGCCA GCGGGCTGCA CGCCCGGATA CTCCGCCAGA TCGGGGCCGA CCGCGTGATA 
GAGGTGGAGC GGGAGATGGG CGAGCAGCTG GCGCGGGTGA TGTCCGCCCC GGCGGTGCTG 
GACTACGTGC GGCTCGGCGA GGAGGAGGCG CTGGTGGAGG CCCGGGTCCC CGAGGAGTGG 
TCCGGAAAGA CGCTCGGCGA GCTCGAGCTC GCCCGCCGCG AGGGCCTCAC GGTGGTGGCC 
CTCCGCAAGG GGGACGGCCG GTGGAGGATC CCGCACGGCG ACACCACCCT CGAGGCGGGG 
GACACGGTCG TGGTGGGCGG CACGCGGCAG CACCTGGACC GCTCCGCCCT GCTGCGCGCC 
GGCCGGGGGG GCTGA
 
Protein sequence
MSRQFAVIGL GRVGASMVET LLSLDHDVLG IDRDRDLVQE LSGELPRAEL VVADATEAPT 
LRDLNLEQFD GAAVTIGEDL EASILSAAVL KEIGVPFVVA RAASGLHARI LRQIGADRVI 
EVEREMGEQL ARVMSAPAVL DYVRLGEEEA LVEARVPEEW SGKTLGELEL ARREGLTVVA 
LRKGDGRWRI PHGDTTLEAG DTVVVGGTRQ HLDRSALLRA GRGG