| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1262 |
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| Symbol | |
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| ID | 4116420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1281788 |
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| End bp | 1283587 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036050 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_644038 |
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| Protein GI | 108804101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.212074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTACC TCCCAATAGA GAACCACGGC ATCATCGGCA ACCTGCACAC GGCCGCCCTG
GTCGGCACCG ACGGGACCAT AGACTGGATG TGCCTGCCGC GCTTCGACTC GCCGAGCGTC
TTCGCCGCCA TCCTGGACGA CGAGAGGGGC GGCCACTTCC GCCTGCGCCC CAGGCGCTAC
ATCCGCAGCC AGCAGCTCTA CCTCCCGGAC ACCAACGTGC TCCTCACCCG CTTTCTCGCC
GAGGAGGGGA TGGCCGAGGT GCTGGACTTC ATGCCCATCC TCTCCGGCCC CTCCGAGCGG
CACCGGCTCG TGAGGAGCGT GCGGGTGGTG CGGGGCAGGA TGCCGTTCGA GGCCGAGTGC
CGGCCCGCCT TCGACTACGC CCGCCGCCCC CACAAGCTCT CCGCGGGCAA GGCGGGGGCG
GTGTTCGAGG CGGGGGACCG GGCGCTCGCC CTCTCCGCCG GGGTGCCGCT GGGGGAGGGG
CCCGGCGGGG CGGCCCGGGC CTCGTTCTCC CTCTCGGAGG GCGACGGGAG GGTCACCTTC
CTGCTGGACG AGGCCCGCGC GGGGGAGCCG CCGCCGGGCC CGATGCCCGG GGAGGAGTTC
GAGCGCCTGC TCTCCAGGAC GCTCGACTAC TGGCGGCGCT GGGTCTCGCG CAGCACCTAC
TCCGGGCGCT GGCGCGAGCT GGTGAACCGC TCCGCGCTGG TGCTCAAGCT CATGGTCTAC
GACCCCACCG GGGCGCTCGT CGCCGCCCCC ACCATGGGCC TGCCGGAGAG GGTCGGCGGC
GAGCGCAACT GGGACTACCG CTACACCTGG CTGCGGGACG CGGCCTTCAC GCTCTACGCC
CTGCTCTCCA TCGGCTTCCA CGAGGAGGCC GGCAGCTTCA TGGGCTGGCT CACCGAGCGC
TGCGCCCAGG ACGACGACGG CCTGCTGCAG CCGCTCTACG GCATCGACGG GCGCGCCGAG
ATCCCGGAGG AGACCCTCGA CCACCTCTCC GGCTACCGCA ACTCGCGGCC GGTACGGGTG
GGCAACGCGG CCTACCGCCA GGTGCAGCTC GACCTCTACG GGGCCGTCCT CGACGCGGCT
TACCTGTACA ACAAGCACGG AGCCCCCCTG GACTACGACA CCTGGCAGAA CCTCCGCCGG
ATCCTCGGCT GGCTCAGCGA CAACTGGCGG CTCCCGGACG AGGGGATCTG GGAGGTGCGG
GGGGGCCGGC GGCGCTTCGT CTCCTCCAGG GTCATGTCCT GGGTGGCGCT GGAGCGGGCC
GTGAGGATCT CCCGCAAGCG CGGGCTGCCG GCGGGCGAGG GGCGCTGGGT CCGGGAGCGC
GACGCGATCT ACGAGGAGGT CATGGAGAAG GGCTGGAGCG AGGGGCGGCA GAGCTTCGTC
CAGTACTACG GCTCCGAGGC CCTCGACGCC TCCCTGCTGC TGATGCCGCT GGTGAAGTTC
GTCGGGCCCA CCGACCCGCG CTGGCTCTCG ACGCTCGACA GGGTCCGGCG CGAGCTCGCC
CACGACGCGC TGGTGGACCG CTACAGGATC GGGGAGGCCG CCGACGACGG GCTCTCGGGC
ACCGAGGGGA GCTTCAGCCT GTGCTCCTTC TGGCTCGTGG AGTGCCTGAC GCGCGCCGGG
CGGCTGGAGG AGGCCCGCCT GGCCTTCGAG AAGATGCTCT CCTACGCCAA CCACCTGGGG
CTGTATGCCG AGGAGATAGG AGCCTCTGGG GAGGCCCTCG GCAACTTCCC GCAGGCCCTC
ACCCACCTCT CCCTGATCAG CGCGGCGGTC CACCTGGACC GGGCGCTCGG CTCCGGGTGA
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| Protein sequence | MAYLPIENHG IIGNLHTAAL VGTDGTIDWM CLPRFDSPSV FAAILDDERG GHFRLRPRRY
IRSQQLYLPD TNVLLTRFLA EEGMAEVLDF MPILSGPSER HRLVRSVRVV RGRMPFEAEC
RPAFDYARRP HKLSAGKAGA VFEAGDRALA LSAGVPLGEG PGGAARASFS LSEGDGRVTF
LLDEARAGEP PPGPMPGEEF ERLLSRTLDY WRRWVSRSTY SGRWRELVNR SALVLKLMVY
DPTGALVAAP TMGLPERVGG ERNWDYRYTW LRDAAFTLYA LLSIGFHEEA GSFMGWLTER
CAQDDDGLLQ PLYGIDGRAE IPEETLDHLS GYRNSRPVRV GNAAYRQVQL DLYGAVLDAA
YLYNKHGAPL DYDTWQNLRR ILGWLSDNWR LPDEGIWEVR GGRRRFVSSR VMSWVALERA
VRISRKRGLP AGEGRWVRER DAIYEEVMEK GWSEGRQSFV QYYGSEALDA SLLLMPLVKF
VGPTDPRWLS TLDRVRRELA HDALVDRYRI GEAADDGLSG TEGSFSLCSF WLVECLTRAG
RLEEARLAFE KMLSYANHLG LYAEEIGASG EALGNFPQAL THLSLISAAV HLDRALGSG
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