| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1231 |
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| Symbol | |
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| ID | 4116234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1251349 |
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| End bp | 1252233 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638036020 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_644008 |
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| Protein GI | 108804071 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.927052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGACGG ACCTGACGAG AAGACCGGAG AACGCGCGGG CCGGGCGCGA GCCGGAGACG
CCGGAGCTTC TGGCCAAGTA CCTGGCGCAC ATCGGTCAGG GGGAGCTCCT CACGCACCAG
GAGGAGATAG AGCTCTCCAG GAGGGCCAAG AAGGGCGACA GAAAGGCCCG CCAGAAGCTC
ATAGAGAAGA ACCTGAGGCT CGTTGTCTCG GTGGCCAAGA AGTACCGCGG CTACGGGCTG
CCCTTCGAGG ATCTCATCCA GGAGGGCAAC ATAGGGCTCA TGAAGGCGGT CGAGAAGTTC
GACCCCGAGC GGGGCTTTCG CTTCTCTACG TATGCGACGT GGTGGATAAG GCAGGCCGTG
CAGCGGGCGG TTGCGGACAA GGGCCGCACC ATAAGGGTGC CGGTGCACAT GACCGAGAAG
ATCCGCAAGG TCAGCCGCAC CTTCAACGAG CTCTCTCTGG AGCTAGAGCG GGAGCCCACC
GACGAGGAGA TAGCGCGCCG GCTGGAGTGG GATGTGGAGG ACGTGCGGCT GACCATAAGC
GCAATGCCCG ACGCCACGAG CCTCGACCAG CCGGTCTCCA GCGAGGAGTC TGCCTCGGAG
CTTGGGGACT TCATCGAGGA CGAGCGCACC TCCGACACCC CCGACACGGT GCTCAAGGAG
CTTGAGAGCA GCCAGCTCAA GGAGGCCATA GAGCGGCTGC CGGAGCGGGC GCGCTACGTG
CTGGTGAGGC GCTACGGCCT CGACGACCGG GAGCCGGCGA CGCTGGCGGA GCTTGGGGAC
GAGCTGAAGA TCTCTAGGGA GCGGGTCAGG CAGCTGCAGC GCGAGGCCGA GCGGATCCTG
AAGAGCGGGG AGCACGGCCG GGTGCTCCGC AACGCGGTGG CCTGA
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| Protein sequence | MATDLTRRPE NARAGREPET PELLAKYLAH IGQGELLTHQ EEIELSRRAK KGDRKARQKL
IEKNLRLVVS VAKKYRGYGL PFEDLIQEGN IGLMKAVEKF DPERGFRFST YATWWIRQAV
QRAVADKGRT IRVPVHMTEK IRKVSRTFNE LSLELEREPT DEEIARRLEW DVEDVRLTIS
AMPDATSLDQ PVSSEESASE LGDFIEDERT SDTPDTVLKE LESSQLKEAI ERLPERARYV
LVRRYGLDDR EPATLAELGD ELKISRERVR QLQREAERIL KSGEHGRVLR NAVA
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