Gene Rxyl_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1228 
Symbol 
ID4116231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1249455 
End bp1249871 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content68% 
IMG OID638036017 
Productferric uptake regulator family protein 
Protein accessionYP_644005 
Protein GI108804068 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAGT TCGAGCAGAT CCTGCGGAGC CGGGGCTACC GGCTGACCAA CCAGCGGCGG 
GTGATCGTCC GGGAGCTGGA GGGCGAGCGG CACCTTTCGG CGGAGGAGAT CTACGAGCGG
GTGAAGGAGG AGCACCCCGA GCTGGGCCTC TCGACGGTGT ACCGGACGCT GGATCTTCTG
CACGAGCTGG GGATCGTGCG CAAGGAGGAC TTCGGCGAGG GCTACTCGCG CTACGAGCTG
GCCACGGAGC GGATGCACCA CCACGCCCGC TGCCGGGGGT GCGGGAAGGT GATCGAGTTC
AACGAGGAGC TCATGGAGTA CCTGACGCTG CAGGTGGAGC GGGAGACCGG CTTCGTCACG
GACTCCTACG AGATCACGCT GCACGGCCTC TGCCGGGAGT GCGCCGCGGC GGGCTAG
 
Protein sequence
MMEFEQILRS RGYRLTNQRR VIVRELEGER HLSAEEIYER VKEEHPELGL STVYRTLDLL 
HELGIVRKED FGEGYSRYEL ATERMHHHAR CRGCGKVIEF NEELMEYLTL QVERETGFVT
DSYEITLHGL CRECAAAG