| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1205 |
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| Symbol | |
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| ID | 4116109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1223572 |
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| End bp | 1227222 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035995 |
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| Product | respiratory nitrate reductase alpha subunit apoprotein |
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| Protein accession | YP_643983 |
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| Protein GI | 108804046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGAAC CCACCAACCC GCTGCTCAGG GGGATGCAGT ACCTGGCGCG GACCGAGCGG
CGTTCCGGGG GGCACGGGGA GCTCAGCGCC CGCGACAGGG AGTGGGAGCG GGCCTACCGA
CAGCGGTGGC AGCACGACCG GGTCGTGCGC TCCACCCACG GCGTCAACTG CACCGGGTCG
TGCTCGTGGA AGATCTACGT CAAGGACGGG ATCATCACCT GGGAGACCCA GCAGACCGAC
TACCCCTCCA ACGGCCCGGA CATGCCCGAG TACGAGCCGC GGGGCTGCCC GCGGGGGGCC
TCGTTCTCCT GGTACACCTA CTCGCCCCTG AGGATCAAGT ACCCCTACGT GCGCGGGGCG
CTGCTCGAGG CGTACCGCGA GGCCAAGGGG AGGACCGGGG ACCCCGTGGA GGCCTGGGCG
AGCGTGGTCG AGGACCCGGA GAAGGCGCGC CGCTACAAGG CGGCCAGGGG CAAGGGCGGC
CTCGAGCGGG CCTCTTGGGA GGAGGCCGCG GAGATCATCG CCGCGGCCCA CGTCTACACC
ATAAAGAAGT ACGGACCGGA CCGGGTGGTG GGCTTCTCCC CGATCCCGGC GATGAGCATG
GTCAGCTACT CCGGCGGGAC GCGCTTTCTC TCGCTCATCG GGGGGGTCAT CCCCAGCTTC
TACGACTGGT ACTCGGACTG GCCGCCGGCC TCCCCCCAGA TCTGGGGCGA CCAGACCGAC
GTGCCCGAGT CCGCCGACTG GTGGAACGCC TCCTACCTCA TGATGTGGGG TTCAAACGTC
CCCATCACCC GCACCCCGGA CGCCCACTTC ATGACCGAGG CCCGCTACAA GGGCCAGAAG
GTGGTGGTCG TAAGCCCCGA CTACTCGGAC CACACCAAGT TCGCCGACCA CTGGCTTCCG
GTCCAGCCCG GCACGGACGG GGCGCTCGCG ATGGCGATGG GGCACGTGAT CCTGAAGGAG
TTCTACGTCG AGCGGCAGGT CCCCTACTTT CTGGAGTACG CCAAGAAGCA CACCGACCTG
CCGATGCTCG TGACGCTCCG GGAGCGCGGG GGGGCCTGGG TGCCCGACCG CTTCCTGCGC
GCAACCGACC TCGGCGACGG GTCTGAGAAC GCCGAGTGGA AGACCGTCCT CCTGGACGCG
GCGGGCGGCG GGCCCGTGGT GCCCAACGGG TCGATGGGCT TCAAGTACGG CGAGGAGGGG
GAGGGGAGGT GGAACCTCGA GCTCGGCGCA ACCGACCCCC TGCTCTCCCT GCTCGGCTCC
CACGAGGAGC TGGTCGAGGT CGAGCTGCCG CGCTTCGACG GCGCCGGGGA GGGCGCGGCC
ACGCTGCGCC GGGGCGTGCC CGCCCGTCGC CTGGGCGGGC GCCTCGTCAC CACCGTCTAC
GACCTCCTGC TCGCCCAGTA CGGGGTGCGC CGCGAGGGCC TGCCCGGGGA GTGGCCCGGA
GGCTACGAAG ACCCCGAGCC CTACACCCCC GCGTGGCAGC AGGAGATCAC CGGGGTCGAT
GCCGGGAGGG CCGCCCGCAT CGGGCGCGAG TTCGCCCGCA ACGCCGAGCG CACCGGCGGG
CGCTCGATGA TCATCATGGG GGCGGGCACC AACCACTGGT ACCACTCCGA CCAGATATAC
AGGGCCATGC TCGCGCTCGT GCTCCTGTGC GGCTGCCAGG GCAGGAACGG GGGCGGCTGG
GCGCACTACG TCGGTCAGGA GAAGGTGCGG CCCATAACCG GCTGGTCCAC CGTGGCCTTC
GCGCTGGACT GGAACCGCCC GCCGCGGCAC ATGGCCGGGA CCACCCTCTG GTATCTCGCG
ACCGAGCAGT GGCGCTACGA GCACATGGGG GCGGACGAGC TCGCCGCCCC GACCGGGAAG
GGGCGGCTCG CGGGGATGCA CTTCGCCGAC TGCGTGGCGC TCTCCGCCCG GCTGGGCTGG
CAGCCCTCCT ACCCCACCTT CGACCGCAAC CCCCTCGAGA TAGCCGAGGC GGCGGAGCGG
GAGGGCGTCG GCGTCGAGGA GTACGTGCTG CGGGAGCTCC GGGAGGGGCG CCTCCGCTTC
GCCTGCGAGG ACCCGGGCGC GCCGGAGAAC TTCCCGCGCG TCCTGACCCT GTGGCGCTCC
AACCTGCTCG GCTCCTCCGG CAAGGGGCAC GAGTACTTCC TCAAGCACCT GCTCGGCGTC
CCCGACGCGG CGGTGCGCAA CGAAGAGACC CCGGAGGGGC TGCGCCCGAA GGAGGTCGTG
TGGCGCGAGC GGGCGGCGGA GGGCAAGCTC GACCTGCTCA CCACGCTGGA CTTCCGCAAG
AACGGCTCCT CCATCTACTC GGACATCGTG CTCCCGGCCG CCACGTGGTA CGAGAAGCAC
GACCTCTCCT CGACGGATCT GCACCCCTTC GTGCACCCCT TCAACCCCGC CATCACGCCG
CCTTGGGAGG CGAAGAGCGA CTGGGAGATC TTCAAGCTCA TCGCCCGGGT CTTCTCCGGG
CTCGCGAGAG AGCACCTCGG CGTCAGGAAG GACGTCGTCG CCGCGCCGCT GCTGCACGAC
ACGCCGGACG AGATCTCCCA GCCCTTCGGC GAGGTGCGCG ACTGGAAGAA GGGCGAGTGC
GAGCCCGTCC CGGGCAGGAC GATGCCCAAG CTCGTCACCG TCGAGCGCGA CTACGGCGCG
GTCGCCGAGA AGATGACCGC GCTCGGGCCG CTCGTCGAGG AGCTCGGCGT CGGGGTCAAG
GGGGTCTCCT GGAGGCCCGT CCCCGAGGTG GAGGAGATGA GGACCAAGAA CGGCGCCGTG
CGCGGGGGGC CCGCGGCCGG CCGGCCCGTG ATGGAGCGCG ACGACCAGGT CTGCGAGGCC
ATCCTCGCCC TCTCGGGCAC CACCAACGGG CGCCTCGCCG TAGAGGGTTT CAGGGCGCTC
GAGCGGCGCA CCGGCCGGCG GCTCGCCGAC CTCGCCGAGG AGCGGGGGGA CGACAGGATC
ACCTTCCCCG ACATAACCGC CCAGCCCCGC AAGGTCATCG CCTCGCCCGA GTGGTCCGGG
ACCGAGAGCC GCAGGCGGCG CTACTCGCCG TTCACCATCA ACGTCGACCG CCGGATACCC
TGGCGCACCC TGACCGGGCG CCAGCAGTTC TACGTGGACC ATGAGTGGAT GCTCGAGTAC
GGCGAGGGGC TCCCCGTCTA CCGGCTGCCC CTCAACCTCA GGCCCCACCT CCGCTCCATC
GGCGACGGGG AGGCCGAGGT GGTCGTCCGC TACCTCACGC CGCACTCCAA GTGGTCCATC
CACTCCGAGT ACCAGGACAA CCTGCACATG CTCATCCTCT TCAGGGGCGG GCCCGTGATC
TGGATGAGCG TCGAGGACGC CCGGAGCATC GGCGTCCGCG ACAACGACTG GGTGGAGGTC
TACAACGCCC ACGGGGTCAT CGCGACGCGG GCGGTCGTCA GCCACCGCAT CCCGCAGGGG
ACCGCGATCA TGTACCACGC CCAGGACCGG CACGTCAACG TGCCCATAAG CGAGCTCTCC
GGCACCCGCG GCGGGACGGA CAACTCCACC ACCAAGATCG TCGTCAAGCC CACCCACATG
ATCGGGGGCT ACGCCCAGTT CTCGTTCGCC CTCAACTACT ACGGCCCCGC CGGGTCGCAG
CGCGACGAGC TGACCATCAT CCGCAAGCGC CGGAGGGAGG TGGCCTACTG A
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| Protein sequence | MSEPTNPLLR GMQYLARTER RSGGHGELSA RDREWERAYR QRWQHDRVVR STHGVNCTGS
CSWKIYVKDG IITWETQQTD YPSNGPDMPE YEPRGCPRGA SFSWYTYSPL RIKYPYVRGA
LLEAYREAKG RTGDPVEAWA SVVEDPEKAR RYKAARGKGG LERASWEEAA EIIAAAHVYT
IKKYGPDRVV GFSPIPAMSM VSYSGGTRFL SLIGGVIPSF YDWYSDWPPA SPQIWGDQTD
VPESADWWNA SYLMMWGSNV PITRTPDAHF MTEARYKGQK VVVVSPDYSD HTKFADHWLP
VQPGTDGALA MAMGHVILKE FYVERQVPYF LEYAKKHTDL PMLVTLRERG GAWVPDRFLR
ATDLGDGSEN AEWKTVLLDA AGGGPVVPNG SMGFKYGEEG EGRWNLELGA TDPLLSLLGS
HEELVEVELP RFDGAGEGAA TLRRGVPARR LGGRLVTTVY DLLLAQYGVR REGLPGEWPG
GYEDPEPYTP AWQQEITGVD AGRAARIGRE FARNAERTGG RSMIIMGAGT NHWYHSDQIY
RAMLALVLLC GCQGRNGGGW AHYVGQEKVR PITGWSTVAF ALDWNRPPRH MAGTTLWYLA
TEQWRYEHMG ADELAAPTGK GRLAGMHFAD CVALSARLGW QPSYPTFDRN PLEIAEAAER
EGVGVEEYVL RELREGRLRF ACEDPGAPEN FPRVLTLWRS NLLGSSGKGH EYFLKHLLGV
PDAAVRNEET PEGLRPKEVV WRERAAEGKL DLLTTLDFRK NGSSIYSDIV LPAATWYEKH
DLSSTDLHPF VHPFNPAITP PWEAKSDWEI FKLIARVFSG LAREHLGVRK DVVAAPLLHD
TPDEISQPFG EVRDWKKGEC EPVPGRTMPK LVTVERDYGA VAEKMTALGP LVEELGVGVK
GVSWRPVPEV EEMRTKNGAV RGGPAAGRPV MERDDQVCEA ILALSGTTNG RLAVEGFRAL
ERRTGRRLAD LAEERGDDRI TFPDITAQPR KVIASPEWSG TESRRRRYSP FTINVDRRIP
WRTLTGRQQF YVDHEWMLEY GEGLPVYRLP LNLRPHLRSI GDGEAEVVVR YLTPHSKWSI
HSEYQDNLHM LILFRGGPVI WMSVEDARSI GVRDNDWVEV YNAHGVIATR AVVSHRIPQG
TAIMYHAQDR HVNVPISELS GTRGGTDNST TKIVVKPTHM IGGYAQFSFA LNYYGPAGSQ
RDELTIIRKR RREVAY
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