Gene Rxyl_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1143 
Symbol 
ID4117375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1173456 
End bp1174319 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content71% 
IMG OID638035933 
Producthypothetical protein 
Protein accessionYP_643921 
Protein GI108803984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTGAGT ACCTGCTCGA GCCGCTCGCC TACGGCTTCA TGCAGCGGGG GCTGCTCGCC 
TCCGTGCTCG TCGCGGTGGT GTGCGGGGCG CTCGGGAGCT TCGTCGTGCT CAAGGGGCTC
GCGTTCATCG GGGATGCTCT GGCGCACGCC AGCTTCGGCG GGGTGGCGCT GGCCTTCGTC
CTCGGGCTCA ACGTGTACGC CGGGGCCTTC GTCTTCGCGC TGGCCACCGC CTTGGGCATC
GGGGCCCTCA GCCAGCACGG CAAGGTGCGC TCGGACACCG CCATCGGGGT TCTGTTCTCC
GGGACGTTCG CGCTCGGCAT CGCGGTCATC AGCGGCGTGG AGAGCTACAC CACCGACCTC
TTCGGCTACC TCTTCGGGGA CGTGCTCTCC ATCACGGCGC GCGACCTTGC GGCCATCTCG
CTCGCCGGGG CGGCGGTGCT CGCCCTGCTC GGGCTCTTCT ACCGGCAGCT GCTCTTCGTC
GCCTTCGACC CGGCCGTTGC GGCGGCCTCC GGGGTGCCGG CCCGGGCGCT GGAGTACCTG
CTGCTCGCGC TGCTCGGGAT GACCATCGTC GCGGCGCTGC AGGCGGTGGG GATCGTGCTC
GTGGTGGCGC TGCTGGTCAC CCCCTCGGCG ACGGCCCACC TGTTCTGCCG CCGGTTCCAC
CACATGATCC TGGCGAGCAT GGTGCTGGGC AGCCTCTCGG CGCTCCTCGG GATCTACCTC
TCCTACTACC TGAACGTGGC CTCGGGCGCC TCGATCATCC TGGTGGCCAC GGCGCTCTTC
TTCGCCGCTC TGGGCGGCCG GGCGCTGCTG CGGCGGGCGG GGGGCTGGCG TTCCGGGGTG
CGCCGGGGCT ACCATTCCGC CTGA
 
Protein sequence
MGEYLLEPLA YGFMQRGLLA SVLVAVVCGA LGSFVVLKGL AFIGDALAHA SFGGVALAFV 
LGLNVYAGAF VFALATALGI GALSQHGKVR SDTAIGVLFS GTFALGIAVI SGVESYTTDL
FGYLFGDVLS ITARDLAAIS LAGAAVLALL GLFYRQLLFV AFDPAVAAAS GVPARALEYL
LLALLGMTIV AALQAVGIVL VVALLVTPSA TAHLFCRRFH HMILASMVLG SLSALLGIYL
SYYLNVASGA SIILVATALF FAALGGRALL RRAGGWRSGV RRGYHSA