Gene Rxyl_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0971 
Symbol 
ID4115934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1007988 
End bp1008602 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID638035756 
Productrare lipoprotein A 
Protein accessionYP_643750 
Protein GI108803813 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.619688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGGA TGTTCGGGGT GTTTCTTTTG GGGTTGATCG CGTGCGCGGC CGCGGGGGTC 
TTCGCGGACC GGGCCGAGGC GGAGACGGCG CTGGCCTCCT GGTACGGGCC GGGCTTTGCC 
GGCAACCCGA CGGCGAGCGG CGAGCCCTAC GACCCCAGCG CCTTCACCGC GGCCCACAAG 
ACGCTGCCGC TCGGGACCCA GCTGCAGGTG AGCTACAACG GCCGCTCGGT GCTGGTGACC 
GTCAACGACC GCGGGCCTTA CGTGCCGGGG CGGGAGCTGG ACCTCTCGCA GGCGGCTGCG 
GAGTATCTGG GTCTCACCCA GGCCGGGGTG GACTACGTCA CCTACAACTA CGCCGGGGAC 
GTGGCCTACG CGGGCGACGT GTCCTACGGC GGCGGGTCCG GCGGCTACAA CGCTTACTCT 
CCCACCGCGC CCCAGGCGCA GCAGGCGACC TACGGCGGCG CGGGGGCGCA GCAGGGGGGC 
GTCTATGTGG TGCAGCCCGG GGACACCCTG TACGGCATAG CCGCGGAGCT CGGGACCACG 
GTCGAGGAGC TCGCGGCAGC CAACGGCATC GCCGACCCGA ACCTCATAGT GCCGGGGCAG 
GAGATCCGCT ACTGA
 
Protein sequence
MSRMFGVFLL GLIACAAAGV FADRAEAETA LASWYGPGFA GNPTASGEPY DPSAFTAAHK 
TLPLGTQLQV SYNGRSVLVT VNDRGPYVPG RELDLSQAAA EYLGLTQAGV DYVTYNYAGD 
VAYAGDVSYG GGSGGYNAYS PTAPQAQQAT YGGAGAQQGG VYVVQPGDTL YGIAAELGTT 
VEELAAANGI ADPNLIVPGQ EIRY